Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_00180

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
31,126	-		AO356_00170	0.46	-1.3
31,189	-		AO356_00170	0.57	+0.3
31,266	+		AO356_00170	0.71	+0.3
31,319	+		AO356_00170	0.81	+0.9
31,437	+				+1.1
31,461	-				+0.0
31,461	-				-0.3
31,554	+		AO356_00175	0.26	-0.4
31,554	+		AO356_00175	0.26	-0.5
31,555	-		AO356_00175	0.26	+0.5
31,555	-		AO356_00175	0.26	-0.8
31,689	-		AO356_00175	0.52	-1.7
31,845	+		AO356_00175	0.82	-1.8
31,845	+		AO356_00175	0.82	+0.6
31,846	-		AO356_00175	0.83	+0.9
31,898	-				-0.7
31,993	+				+0.7
31,993	+				+0.9
31,994	-				+0.6
31,994	-				+1.0
31,994	-				+0.0
31,994	-				+0.4
32,000	+				-0.2
32,035	+				+0.2
32,092	+				+0.0
32,093	-				-0.7
32,094	+				-0.7
32,146	-				-0.3
32,146	-				+1.0
32,155	-				-0.2
32,373	+		AO356_00180	0.20	-0.4
32,374	-		AO356_00180	0.20	+0.6
32,453	+		AO356_00180	0.24	+1.0
32,454	-		AO356_00180	0.24	+1.1
32,567	-		AO356_00180	0.30	+0.3
32,567	-		AO356_00180	0.30	+1.9
32,567	-		AO356_00180	0.30	-0.3
32,604	-		AO356_00180	0.31	-0.5
32,604	-		AO356_00180	0.31	+0.1
32,604	-		AO356_00180	0.31	-0.2
32,622	+		AO356_00180	0.32	-1.3
32,653	+		AO356_00180	0.34	-0.2
32,654	-		AO356_00180	0.34	-1.3
32,654	-		AO356_00180	0.34	-1.0
32,654	-		AO356_00180	0.34	-1.5
32,654	-		AO356_00180	0.34	-1.0
32,654	-		AO356_00180	0.34	-0.6
32,692	+		AO356_00180	0.35	-1.0
32,693	-		AO356_00180	0.36	+0.5
32,706	-		AO356_00180	0.36	+1.8
32,731	+		AO356_00180	0.37	+0.7
32,732	-		AO356_00180	0.37	-0.9
33,076	+		AO356_00180	0.54	-1.0
33,076	+		AO356_00180	0.54	+0.5
33,120	-		AO356_00180	0.56	-0.7
33,120	-		AO356_00180	0.56	+0.7
33,148	+		AO356_00180	0.57	+1.2
33,149	-		AO356_00180	0.57	-0.6
33,149	-		AO356_00180	0.57	-0.7
33,195	+		AO356_00180	0.59	-0.2
33,195	+		AO356_00180	0.59	-0.7
33,195	+		AO356_00180	0.59	-0.9
33,195	+		AO356_00180	0.59	-0.1
33,218	+		AO356_00180	0.60	-0.9
33,232	+		AO356_00180	0.61	-0.9
33,242	+		AO356_00180	0.62	+0.4
33,242	+		AO356_00180	0.62	-0.5
33,242	+		AO356_00180	0.62	+0.6
33,243	-		AO356_00180	0.62	+0.1
33,243	-		AO356_00180	0.62	+0.7
33,302	-		AO356_00180	0.64	+0.9
33,394	+		AO356_00180	0.69	+1.1
33,551	-		AO356_00180	0.76	-0.4
33,551	-		AO356_00180	0.76	-0.1
33,551	-		AO356_00180	0.76	+1.2
33,671	+		AO356_00180	0.82	-1.3
33,671	+		AO356_00180	0.82	-0.3
33,691	-		AO356_00180	0.83	-1.3
33,701	+		AO356_00180	0.83	+1.1
33,701	+		AO356_00180	0.83	+0.2
33,702	-		AO356_00180	0.83	+0.5
33,826	-		AO356_00180	0.89	-0.1
33,826	-		AO356_00180	0.89	+0.6
33,836	+		AO356_00180	0.90	-1.3
33,891	+				-0.5
33,891	+				-1.3
33,892	-				+0.3
33,924	+				-0.9
33,925	-				-0.9
33,925	-				-0.5
33,925	-				-0.4
33,948	+				-1.7
33,948	+				-2.4
33,971	-				-0.4
34,048	+				+0.1
34,048	+				+1.3
34,049	-				-0.4
34,051	+				+1.2
34,052	-				-0.8
34,052	-				-1.0
34,080	+				-0.5
34,080	+				-0.4
34,081	-				+0.6
34,081	-				+0.3
34,081	-				+0.6
34,560	+		AO356_00185	0.57	+0.3
34,560	+		AO356_00185	0.57	+0.1
34,561	-		AO356_00185	0.58	-0.3
34,561	-		AO356_00185	0.58	+0.8
34,565	+		AO356_00185	0.58	-0.4
34,591	+		AO356_00185	0.62	-0.7
34,591	+		AO356_00185	0.62	+0.7
34,628	+		AO356_00185	0.67	-0.4
34,629	-		AO356_00185	0.67	-0.2
34,658	-		AO356_00185	0.71	+0.3
34,707	+		AO356_00185	0.77	+0.1
34,730	-		AO356_00185	0.81	+0.9
34,758	-		AO356_00185	0.84	-1.5
34,762	-		AO356_00185	0.85	-0.7
34,762	-		AO356_00185	0.85	-0.5
34,765	+		AO356_00185	0.85	-0.4
34,863	+				+0.3
34,870	-				+1.7
34,943	+				-1.4
34,944	-				-1.7
34,944	-				-0.6
34,947	+				+0.2
34,947	+				+0.8
34,948	-				-0.4