Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2653 and DvMF_2654 are separated by 171 nucleotides DvMF_2654 and DvMF_2655 are separated by 213 nucleotides DvMF_2655 and DvMF_2656 are separated by 274 nucleotides DvMF_2656 and DvMF_2657 are separated by 131 nucleotides
DvMF_2653: DvMF_2653 - Carboxymuconolactone decarboxylase (RefSeq), at 3,353,841 to 3,354,257
_2653
DvMF_2654: DvMF_2654 - acetyltransferase (RefSeq), at 3,354,429 to 3,354,938
_2654
DvMF_2655: DvMF_2655 - hypothetical protein (RefSeq), at 3,355,152 to 3,355,688
_2655
DvMF_2656: DvMF_2656 - Glyoxalase/bleomycin resistance protein/dioxygenase (RefSeq), at 3,355,963 to 3,356,385
_2656
DvMF_2657: DvMF_2657 - Serine O-acetyltransferase (RefSeq), at 3,356,517 to 3,357,470
_2657
Position (kb)
3355
3356 Strain fitness (log2 ratio)
-2
-1
0
1 at 3354.183 kb on - strand, within DvMF_2653 at 3354.384 kb on - strand at 3355.080 kb on + strand at 3355.296 kb on - strand, within DvMF_2655 at 3355.396 kb on + strand, within DvMF_2655 at 3355.445 kb on + strand, within DvMF_2655 at 3355.453 kb on - strand, within DvMF_2655 at 3355.463 kb on - strand, within DvMF_2655 at 3355.464 kb on - strand, within DvMF_2655 at 3355.484 kb on + strand, within DvMF_2655 at 3355.692 kb on + strand at 3356.140 kb on + strand, within DvMF_2656 at 3356.166 kb on + strand, within DvMF_2656 at 3356.357 kb on - strand at 3356.434 kb on + strand at 3356.553 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,354,183 - DvMF_2653 0.82 -1.5 3,354,384 - -0.7 3,355,080 + -0.9 3,355,296 - DvMF_2655 0.27 -0.9 3,355,396 + DvMF_2655 0.45 -0.7 3,355,445 + DvMF_2655 0.55 -0.7 3,355,453 - DvMF_2655 0.56 -0.7 3,355,463 - DvMF_2655 0.58 -0.2 3,355,464 - DvMF_2655 0.58 -1.4 3,355,484 + DvMF_2655 0.62 -1.3 3,355,692 + -0.5 3,356,140 + DvMF_2656 0.42 -1.6 3,356,166 + DvMF_2656 0.48 -0.6 3,356,357 - -0.8 3,356,434 + -0.5 3,356,553 - -2.6
Or see this region's nucleotide sequence