Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2601 and DvMF_2602 overlap by 4 nucleotides DvMF_2602 and DvMF_2603 are separated by 510 nucleotides
DvMF_2601: DvMF_2601 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 3,286,232 to 3,287,632
_2601
DvMF_2602: DvMF_2602 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 3,287,629 to 3,290,469
_2602
DvMF_2603: DvMF_2603 - hypothetical protein (RefSeq), at 3,290,980 to 3,292,089
_2603
Position (kb)
3287
3288
3289
3290
3291 Strain fitness (log2 ratio)
-1
0
1 at 3286.630 kb on - strand, within DvMF_2601 at 3286.656 kb on - strand, within DvMF_2601 at 3286.897 kb on + strand, within DvMF_2601 at 3286.965 kb on + strand, within DvMF_2601 at 3286.973 kb on - strand, within DvMF_2601 at 3286.973 kb on - strand, within DvMF_2601 at 3286.973 kb on - strand, within DvMF_2601 at 3287.121 kb on + strand, within DvMF_2601 at 3287.129 kb on - strand, within DvMF_2601 at 3287.129 kb on - strand, within DvMF_2601 at 3287.254 kb on - strand, within DvMF_2601 at 3287.290 kb on + strand, within DvMF_2601 at 3287.484 kb on + strand, within DvMF_2601 at 3287.506 kb on - strand at 3287.636 kb on - strand at 3287.643 kb on - strand at 3287.694 kb on + strand at 3287.985 kb on + strand, within DvMF_2602 at 3288.087 kb on + strand, within DvMF_2602 at 3288.587 kb on + strand, within DvMF_2602 at 3288.627 kb on - strand, within DvMF_2602 at 3288.670 kb on + strand, within DvMF_2602 at 3288.989 kb on - strand, within DvMF_2602 at 3289.012 kb on + strand, within DvMF_2602 at 3289.250 kb on + strand, within DvMF_2602 at 3289.386 kb on - strand, within DvMF_2602 at 3289.538 kb on - strand, within DvMF_2602 at 3289.746 kb on - strand, within DvMF_2602 at 3289.751 kb on - strand, within DvMF_2602 at 3290.039 kb on - strand, within DvMF_2602 at 3290.252 kb on + strand at 3290.290 kb on + strand at 3290.298 kb on - strand at 3290.325 kb on - strand at 3290.437 kb on + strand at 3290.593 kb on - strand at 3290.616 kb on - strand at 3290.786 kb on - strand at 3290.855 kb on + strand at 3290.863 kb on - strand at 3291.119 kb on - strand, within DvMF_2603
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,286,630 - DvMF_2601 0.28 -0.7 3,286,656 - DvMF_2601 0.30 -0.7 3,286,897 + DvMF_2601 0.47 -0.9 3,286,965 + DvMF_2601 0.52 -1.0 3,286,973 - DvMF_2601 0.53 -1.0 3,286,973 - DvMF_2601 0.53 -1.1 3,286,973 - DvMF_2601 0.53 -0.4 3,287,121 + DvMF_2601 0.63 -1.1 3,287,129 - DvMF_2601 0.64 -1.2 3,287,129 - DvMF_2601 0.64 -1.4 3,287,254 - DvMF_2601 0.73 -0.7 3,287,290 + DvMF_2601 0.76 -1.2 3,287,484 + DvMF_2601 0.89 -1.6 3,287,506 - -0.6 3,287,636 - -0.9 3,287,643 - -0.4 3,287,694 + -0.8 3,287,985 + DvMF_2602 0.13 -0.7 3,288,087 + DvMF_2602 0.16 -0.3 3,288,587 + DvMF_2602 0.34 -0.2 3,288,627 - DvMF_2602 0.35 -0.8 3,288,670 + DvMF_2602 0.37 -0.9 3,288,989 - DvMF_2602 0.48 -0.2 3,289,012 + DvMF_2602 0.49 -0.3 3,289,250 + DvMF_2602 0.57 -1.0 3,289,386 - DvMF_2602 0.62 -0.2 3,289,538 - DvMF_2602 0.67 +0.7 3,289,746 - DvMF_2602 0.75 -0.6 3,289,751 - DvMF_2602 0.75 -0.5 3,290,039 - DvMF_2602 0.85 -0.5 3,290,252 + -1.1 3,290,290 + -0.7 3,290,298 - -1.3 3,290,325 - -0.2 3,290,437 + -0.5 3,290,593 - -1.2 3,290,616 - -0.6 3,290,786 - -0.5 3,290,855 + -0.3 3,290,863 - -0.4 3,291,119 - DvMF_2603 0.13 -0.6
Or see this region's nucleotide sequence