Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1989 and DvMF_1990 are separated by 400 nucleotides DvMF_1990 and DvMF_1991 are separated by 35 nucleotides DvMF_1991 and DvMF_1992 are separated by 332 nucleotides
DvMF_1989: DvMF_1989 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 2,462,844 to 2,464,544
_1989
DvMF_1990: DvMF_1990 - Pyruvate, water dikinase (RefSeq), at 2,464,945 to 2,467,740
_1990
DvMF_1991: DvMF_1991 - response regulator receiver protein (RefSeq), at 2,467,776 to 2,468,237
_1991
DvMF_1992: DvMF_1992 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 2,468,570 to 2,469,688
_1992
Position (kb)
2464
2465
2466
2467
2468 Strain fitness (log2 ratio)
-1
0
1 at 2463.987 kb on + strand, within DvMF_1989 at 2464.033 kb on + strand, within DvMF_1989 at 2464.041 kb on - strand, within DvMF_1989 at 2464.203 kb on + strand, within DvMF_1989 at 2464.291 kb on + strand, within DvMF_1989 at 2464.313 kb on + strand, within DvMF_1989 at 2464.318 kb on + strand, within DvMF_1989 at 2464.370 kb on - strand, within DvMF_1989 at 2464.650 kb on + strand at 2465.038 kb on - strand at 2465.391 kb on + strand, within DvMF_1990 at 2465.662 kb on - strand, within DvMF_1990 at 2465.836 kb on - strand, within DvMF_1990 at 2465.915 kb on - strand, within DvMF_1990 at 2465.967 kb on - strand, within DvMF_1990 at 2465.996 kb on - strand, within DvMF_1990 at 2466.341 kb on + strand, within DvMF_1990 at 2466.522 kb on + strand, within DvMF_1990 at 2466.565 kb on - strand, within DvMF_1990 at 2466.602 kb on + strand, within DvMF_1990 at 2466.602 kb on + strand, within DvMF_1990 at 2466.610 kb on - strand, within DvMF_1990 at 2466.610 kb on - strand, within DvMF_1990 at 2466.752 kb on - strand, within DvMF_1990 at 2466.779 kb on + strand, within DvMF_1990 at 2466.889 kb on - strand, within DvMF_1990 at 2466.890 kb on + strand, within DvMF_1990 at 2467.388 kb on - strand, within DvMF_1990 at 2467.510 kb on - strand at 2467.512 kb on + strand at 2468.281 kb on + strand at 2468.388 kb on + strand at 2468.388 kb on + strand at 2468.404 kb on - strand at 2468.423 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,463,987 + DvMF_1989 0.67 -0.7 2,464,033 + DvMF_1989 0.70 +0.5 2,464,041 - DvMF_1989 0.70 -0.5 2,464,203 + DvMF_1989 0.80 -0.9 2,464,291 + DvMF_1989 0.85 -0.3 2,464,313 + DvMF_1989 0.86 +0.4 2,464,318 + DvMF_1989 0.87 -0.5 2,464,370 - DvMF_1989 0.90 -0.6 2,464,650 + -0.1 2,465,038 - +0.3 2,465,391 + DvMF_1990 0.16 -0.3 2,465,662 - DvMF_1990 0.26 -0.3 2,465,836 - DvMF_1990 0.32 -0.3 2,465,915 - DvMF_1990 0.35 -0.2 2,465,967 - DvMF_1990 0.37 -0.9 2,465,996 - DvMF_1990 0.38 -0.2 2,466,341 + DvMF_1990 0.50 -0.9 2,466,522 + DvMF_1990 0.56 -1.2 2,466,565 - DvMF_1990 0.58 -1.0 2,466,602 + DvMF_1990 0.59 -1.0 2,466,602 + DvMF_1990 0.59 -0.6 2,466,610 - DvMF_1990 0.60 -0.3 2,466,610 - DvMF_1990 0.60 -0.5 2,466,752 - DvMF_1990 0.65 -0.5 2,466,779 + DvMF_1990 0.66 -0.7 2,466,889 - DvMF_1990 0.70 -1.7 2,466,890 + DvMF_1990 0.70 -1.2 2,467,388 - DvMF_1990 0.87 -0.1 2,467,510 - -1.5 2,467,512 + -0.2 2,468,281 + -0.8 2,468,388 + -0.6 2,468,388 + -0.3 2,468,404 - -0.3 2,468,423 + -0.2
Or see this region's nucleotide sequence