Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1986 and DvMF_1987 are separated by 373 nucleotides DvMF_1987 and DvMF_1988 are separated by 133 nucleotides DvMF_1988 and DvMF_1989 are separated by 334 nucleotides
DvMF_1986: DvMF_1986 - Superoxide dismutase (RefSeq), at 2,458,170 to 2,458,886
_1986
DvMF_1987: DvMF_1987 - Pyruvate, water dikinase (RefSeq), at 2,459,260 to 2,462,016
_1987
DvMF_1988: DvMF_1988 - response regulator receiver protein (RefSeq), at 2,462,150 to 2,462,509
_1988
DvMF_1989: DvMF_1989 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 2,462,844 to 2,464,544
_1989
Position (kb)
2459
2460
2461
2462
2463 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2458.498 kb on - strand, within DvMF_1986 at 2458.516 kb on - strand, within DvMF_1986 at 2458.529 kb on - strand, within DvMF_1986 at 2458.530 kb on - strand, within DvMF_1986 at 2458.746 kb on + strand, within DvMF_1986 at 2458.940 kb on + strand at 2458.985 kb on + strand at 2459.120 kb on + strand at 2459.357 kb on + strand at 2459.444 kb on + strand at 2459.592 kb on - strand, within DvMF_1987 at 2459.594 kb on + strand, within DvMF_1987 at 2459.602 kb on - strand, within DvMF_1987 at 2459.602 kb on - strand, within DvMF_1987 at 2459.770 kb on - strand, within DvMF_1987 at 2459.900 kb on - strand, within DvMF_1987 at 2459.940 kb on + strand, within DvMF_1987 at 2460.077 kb on - strand, within DvMF_1987 at 2460.127 kb on - strand, within DvMF_1987 at 2460.406 kb on + strand, within DvMF_1987 at 2460.639 kb on + strand, within DvMF_1987 at 2460.710 kb on - strand, within DvMF_1987 at 2460.715 kb on - strand, within DvMF_1987 at 2460.943 kb on - strand, within DvMF_1987 at 2460.943 kb on - strand, within DvMF_1987 at 2461.062 kb on - strand, within DvMF_1987 at 2461.171 kb on - strand, within DvMF_1987 at 2461.183 kb on + strand, within DvMF_1987 at 2461.191 kb on - strand, within DvMF_1987 at 2461.247 kb on - strand, within DvMF_1987 at 2461.600 kb on - strand, within DvMF_1987 at 2461.733 kb on + strand, within DvMF_1987 at 2461.949 kb on + strand at 2461.962 kb on - strand at 2462.431 kb on + strand, within DvMF_1988 at 2462.439 kb on - strand, within DvMF_1988 at 2462.692 kb on + strand at 2462.757 kb on - strand at 2462.814 kb on - strand at 2462.861 kb on + strand at 2462.868 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,458,498 - DvMF_1986 0.46 -0.5 2,458,516 - DvMF_1986 0.48 -0.5 2,458,529 - DvMF_1986 0.50 -0.7 2,458,530 - DvMF_1986 0.50 +0.3 2,458,746 + DvMF_1986 0.80 -1.0 2,458,940 + -0.9 2,458,985 + -1.3 2,459,120 + +0.0 2,459,357 + +0.2 2,459,444 + -0.4 2,459,592 - DvMF_1987 0.12 -0.1 2,459,594 + DvMF_1987 0.12 -1.8 2,459,602 - DvMF_1987 0.12 -0.7 2,459,602 - DvMF_1987 0.12 -0.4 2,459,770 - DvMF_1987 0.18 -0.2 2,459,900 - DvMF_1987 0.23 -0.6 2,459,940 + DvMF_1987 0.25 -0.4 2,460,077 - DvMF_1987 0.30 +0.4 2,460,127 - DvMF_1987 0.31 -1.3 2,460,406 + DvMF_1987 0.42 +0.4 2,460,639 + DvMF_1987 0.50 -2.8 2,460,710 - DvMF_1987 0.53 -0.5 2,460,715 - DvMF_1987 0.53 -1.1 2,460,943 - DvMF_1987 0.61 -0.6 2,460,943 - DvMF_1987 0.61 -3.3 2,461,062 - DvMF_1987 0.65 -0.0 2,461,171 - DvMF_1987 0.69 -1.9 2,461,183 + DvMF_1987 0.70 -0.7 2,461,191 - DvMF_1987 0.70 -0.7 2,461,247 - DvMF_1987 0.72 -0.4 2,461,600 - DvMF_1987 0.85 -0.6 2,461,733 + DvMF_1987 0.90 -0.7 2,461,949 + -1.7 2,461,962 - +0.1 2,462,431 + DvMF_1988 0.78 -0.3 2,462,439 - DvMF_1988 0.80 -0.5 2,462,692 + -2.9 2,462,757 - -0.4 2,462,814 - -1.2 2,462,861 + -0.4 2,462,868 - -0.8
Or see this region's nucleotide sequence