Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1333 and DvMF_1334 are separated by 165 nucleotides DvMF_1334 and DvMF_1335 are separated by 143 nucleotides DvMF_1335 and DvMF_1336 are separated by 179 nucleotides
DvMF_1333: DvMF_1333 - hypothetical protein (RefSeq), at 1,628,407 to 1,628,994
_1333
DvMF_1334: DvMF_1334 - response regulator receiver protein (RefSeq), at 1,629,160 to 1,630,653
_1334
DvMF_1335: DvMF_1335 - hypothetical protein (RefSeq), at 1,630,797 to 1,631,336
_1335
DvMF_1336: DvMF_1336 - hypothetical protein (RefSeq), at 1,631,516 to 1,631,998
_1336
Position (kb)
1629
1630
1631 Strain fitness (log2 ratio)
-1
0
1 at 1628.282 kb on - strand at 1628.507 kb on - strand, within DvMF_1333 at 1628.974 kb on + strand at 1629.180 kb on + strand at 1629.269 kb on - strand at 1629.512 kb on + strand, within DvMF_1334 at 1629.560 kb on - strand, within DvMF_1334 at 1629.615 kb on + strand, within DvMF_1334 at 1629.629 kb on + strand, within DvMF_1334 at 1629.634 kb on + strand, within DvMF_1334 at 1629.779 kb on - strand, within DvMF_1334 at 1629.848 kb on - strand, within DvMF_1334 at 1630.092 kb on - strand, within DvMF_1334 at 1630.450 kb on + strand, within DvMF_1334 at 1630.519 kb on + strand at 1630.588 kb on + strand at 1630.623 kb on + strand at 1630.624 kb on - strand at 1630.631 kb on - strand at 1630.709 kb on + strand at 1631.062 kb on - strand, within DvMF_1335 at 1631.625 kb on - strand, within DvMF_1336 at 1631.632 kb on + strand, within DvMF_1336
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,628,282 - +0.3 1,628,507 - DvMF_1333 0.17 -0.8 1,628,974 + -0.7 1,629,180 + -0.7 1,629,269 - -1.3 1,629,512 + DvMF_1334 0.24 +0.5 1,629,560 - DvMF_1334 0.27 +0.4 1,629,615 + DvMF_1334 0.30 +0.2 1,629,629 + DvMF_1334 0.31 -0.2 1,629,634 + DvMF_1334 0.32 -0.4 1,629,779 - DvMF_1334 0.41 -0.1 1,629,848 - DvMF_1334 0.46 +0.8 1,630,092 - DvMF_1334 0.62 -0.6 1,630,450 + DvMF_1334 0.86 -0.1 1,630,519 + -0.1 1,630,588 + +0.1 1,630,623 + -0.3 1,630,624 - -0.7 1,630,631 - -0.2 1,630,709 + -0.8 1,631,062 - DvMF_1335 0.49 -0.4 1,631,625 - DvMF_1336 0.23 -1.3 1,631,632 + DvMF_1336 0.24 -0.8
Or see this region's nucleotide sequence