Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1168 and DvMF_1169 are separated by 228 nucleotides DvMF_1169 and DvMF_1170 are separated by 410 nucleotides
DvMF_1168: DvMF_1168 - Diaminopimelate epimerase-like protein (RefSeq), at 1,442,677 to 1,443,600
_1168
DvMF_1169: DvMF_1169 - hypothetical protein (RefSeq), at 1,443,829 to 1,446,888
_1169
DvMF_1170: DvMF_1170 - Alcohol dehydrogenase zinc-binding domain protein (RefSeq), at 1,447,299 to 1,448,294
_1170
Position (kb)
1443
1444
1445
1446
1447 Strain fitness (log2 ratio)
-1
0
1 at 1443.017 kb on - strand, within DvMF_1168 at 1443.215 kb on + strand, within DvMF_1168 at 1443.255 kb on - strand, within DvMF_1168 at 1443.255 kb on - strand, within DvMF_1168 at 1443.264 kb on - strand, within DvMF_1168 at 1443.949 kb on - strand at 1444.036 kb on - strand at 1444.087 kb on + strand at 1444.087 kb on + strand at 1444.087 kb on + strand at 1444.803 kb on + strand, within DvMF_1169 at 1444.837 kb on - strand, within DvMF_1169 at 1444.867 kb on - strand, within DvMF_1169 at 1445.077 kb on + strand, within DvMF_1169 at 1445.086 kb on - strand, within DvMF_1169 at 1445.160 kb on + strand, within DvMF_1169 at 1445.178 kb on + strand, within DvMF_1169 at 1445.519 kb on + strand, within DvMF_1169 at 1445.548 kb on + strand, within DvMF_1169 at 1445.585 kb on + strand, within DvMF_1169 at 1445.593 kb on - strand, within DvMF_1169 at 1445.600 kb on + strand, within DvMF_1169 at 1445.603 kb on - strand, within DvMF_1169 at 1445.669 kb on + strand, within DvMF_1169 at 1445.677 kb on - strand, within DvMF_1169 at 1445.811 kb on - strand, within DvMF_1169 at 1445.913 kb on + strand, within DvMF_1169 at 1446.145 kb on + strand, within DvMF_1169 at 1446.153 kb on - strand, within DvMF_1169 at 1446.358 kb on - strand, within DvMF_1169 at 1446.479 kb on - strand, within DvMF_1169 at 1446.697 kb on + strand at 1446.726 kb on - strand at 1446.795 kb on - strand at 1447.093 kb on - strand at 1447.238 kb on + strand at 1447.246 kb on - strand at 1447.246 kb on - strand at 1447.519 kb on - strand, within DvMF_1170 at 1447.741 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,443,017 - DvMF_1168 0.37 -1.0 1,443,215 + DvMF_1168 0.58 -0.8 1,443,255 - DvMF_1168 0.63 -0.5 1,443,255 - DvMF_1168 0.63 -0.7 1,443,264 - DvMF_1168 0.64 -0.5 1,443,949 - +0.3 1,444,036 - -0.1 1,444,087 + -0.5 1,444,087 + -0.2 1,444,087 + -0.1 1,444,803 + DvMF_1169 0.32 -1.5 1,444,837 - DvMF_1169 0.33 +0.0 1,444,867 - DvMF_1169 0.34 -0.5 1,445,077 + DvMF_1169 0.41 -0.1 1,445,086 - DvMF_1169 0.41 -0.8 1,445,160 + DvMF_1169 0.43 -0.7 1,445,178 + DvMF_1169 0.44 -0.9 1,445,519 + DvMF_1169 0.55 +0.6 1,445,548 + DvMF_1169 0.56 -1.2 1,445,585 + DvMF_1169 0.57 -0.9 1,445,593 - DvMF_1169 0.58 -0.0 1,445,600 + DvMF_1169 0.58 -0.9 1,445,603 - DvMF_1169 0.58 -0.0 1,445,669 + DvMF_1169 0.60 -0.8 1,445,677 - DvMF_1169 0.60 -0.4 1,445,811 - DvMF_1169 0.65 -0.3 1,445,913 + DvMF_1169 0.68 +1.2 1,446,145 + DvMF_1169 0.76 +0.0 1,446,153 - DvMF_1169 0.76 -0.5 1,446,358 - DvMF_1169 0.83 -0.9 1,446,479 - DvMF_1169 0.87 -1.4 1,446,697 + -1.2 1,446,726 - -0.5 1,446,795 - +0.0 1,447,093 - -0.8 1,447,238 + -0.6 1,447,246 - -0.7 1,447,246 - -0.5 1,447,519 - DvMF_1170 0.22 +0.6 1,447,741 + +0.3
Or see this region's nucleotide sequence