Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1153 and DvMF_1154 are separated by 168 nucleotides DvMF_1154 and DvMF_1155 are separated by 135 nucleotides DvMF_1155 and DvMF_1156 are separated by 306 nucleotides
DvMF_1153: DvMF_1153 - Phenylacetate--CoA ligase (RefSeq), at 1,414,629 to 1,415,933
_1153
DvMF_1154: DvMF_1154 - protein of unknown function DUF456 (RefSeq), at 1,416,102 to 1,416,611
_1154
DvMF_1155: DvMF_1155 - RNA methyltransferase, TrmH family, group 1 (RefSeq), at 1,416,747 to 1,417,547
_1155
DvMF_1156: DvMF_1156 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 1,417,854 to 1,420,274
_1156
Position (kb)
1416
1417
1418 Strain fitness (log2 ratio)
-1
0
1 at 1415.839 kb on + strand at 1415.847 kb on - strand at 1415.910 kb on - strand at 1416.053 kb on + strand at 1416.162 kb on - strand, within DvMF_1154 at 1416.591 kb on + strand at 1416.596 kb on + strand at 1416.604 kb on - strand at 1416.647 kb on + strand at 1416.890 kb on + strand, within DvMF_1155 at 1416.990 kb on - strand, within DvMF_1155 at 1417.042 kb on - strand, within DvMF_1155 at 1417.066 kb on + strand, within DvMF_1155 at 1417.069 kb on - strand, within DvMF_1155 at 1417.210 kb on - strand, within DvMF_1155 at 1417.220 kb on - strand, within DvMF_1155 at 1417.241 kb on - strand, within DvMF_1155 at 1417.259 kb on + strand, within DvMF_1155 at 1417.487 kb on + strand at 1417.490 kb on - strand at 1417.677 kb on - strand at 1417.865 kb on - strand at 1417.924 kb on + strand at 1417.961 kb on + strand at 1418.151 kb on + strand, within DvMF_1156 at 1418.151 kb on + strand, within DvMF_1156 at 1418.225 kb on + strand, within DvMF_1156 at 1418.225 kb on - strand, within DvMF_1156 at 1418.433 kb on + strand, within DvMF_1156 at 1418.433 kb on + strand, within DvMF_1156 at 1418.445 kb on + strand, within DvMF_1156 at 1418.515 kb on + strand, within DvMF_1156
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,415,839 + -0.6 1,415,847 - +0.1 1,415,910 - -0.5 1,416,053 + -0.2 1,416,162 - DvMF_1154 0.12 -1.1 1,416,591 + -0.3 1,416,596 + +0.1 1,416,604 - -1.0 1,416,647 + -0.8 1,416,890 + DvMF_1155 0.18 -0.2 1,416,990 - DvMF_1155 0.30 +1.0 1,417,042 - DvMF_1155 0.37 -0.4 1,417,066 + DvMF_1155 0.40 -1.1 1,417,069 - DvMF_1155 0.40 +0.3 1,417,210 - DvMF_1155 0.58 -0.7 1,417,220 - DvMF_1155 0.59 -0.5 1,417,241 - DvMF_1155 0.62 +0.2 1,417,259 + DvMF_1155 0.64 -0.6 1,417,487 + -0.7 1,417,490 - -0.9 1,417,677 - +0.0 1,417,865 - -0.6 1,417,924 + -0.5 1,417,961 + +0.5 1,418,151 + DvMF_1156 0.12 -0.9 1,418,151 + DvMF_1156 0.12 -0.7 1,418,225 + DvMF_1156 0.15 -0.1 1,418,225 - DvMF_1156 0.15 +0.3 1,418,433 + DvMF_1156 0.24 -0.7 1,418,433 + DvMF_1156 0.24 +0.0 1,418,445 + DvMF_1156 0.24 -1.0 1,418,515 + DvMF_1156 0.27 -0.6
Or see this region's nucleotide sequence