Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0898 and DvMF_0899 overlap by 23 nucleotides DvMF_0899 and DvMF_0900 are separated by 139 nucleotides DvMF_0900 and DvMF_0901 are separated by 124 nucleotides DvMF_0901 and DvMF_0902 are separated by 267 nucleotides
DvMF_0898: DvMF_0898 - pyridine nucleotide-disulphide oxidoreductase dimerisation region (RefSeq), at 1,082,059 to 1,083,585
_0898
DvMF_0899: DvMF_0899 - SNARE associated Golgi protein (RefSeq), at 1,083,563 to 1,084,339
_0899
DvMF_0900: DvMF_0900 - Glucokinase (RefSeq), at 1,084,479 to 1,085,576
_0900
DvMF_0901: DvMF_0901 - type IV pilus assembly PilZ (RefSeq), at 1,085,701 to 1,086,051
_0901
DvMF_0902: DvMF_0902 - hypothetical protein (RefSeq), at 1,086,319 to 1,087,098
_0902
Position (kb)
1084
1085
1086 Strain fitness (log2 ratio)
-2
-1
0
1 at 1083.665 kb on + strand, within DvMF_0899 at 1083.930 kb on + strand, within DvMF_0899 at 1084.038 kb on + strand, within DvMF_0899 at 1084.040 kb on + strand, within DvMF_0899 at 1084.046 kb on - strand, within DvMF_0899 at 1084.100 kb on + strand, within DvMF_0899 at 1084.100 kb on + strand, within DvMF_0899 at 1084.108 kb on - strand, within DvMF_0899 at 1084.108 kb on - strand, within DvMF_0899 at 1084.172 kb on - strand, within DvMF_0899 at 1084.174 kb on + strand, within DvMF_0899 at 1084.182 kb on - strand, within DvMF_0899 at 1084.226 kb on - strand, within DvMF_0899 at 1084.330 kb on - strand at 1084.394 kb on + strand at 1084.418 kb on - strand at 1084.864 kb on - strand, within DvMF_0900 at 1084.879 kb on - strand, within DvMF_0900 at 1085.212 kb on + strand, within DvMF_0900 at 1085.220 kb on - strand, within DvMF_0900 at 1086.104 kb on + strand at 1086.104 kb on + strand at 1086.137 kb on + strand at 1086.302 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,083,665 + DvMF_0899 0.13 +0.4 1,083,930 + DvMF_0899 0.47 -0.6 1,084,038 + DvMF_0899 0.61 -0.3 1,084,040 + DvMF_0899 0.61 -0.5 1,084,046 - DvMF_0899 0.62 -0.0 1,084,100 + DvMF_0899 0.69 -1.6 1,084,100 + DvMF_0899 0.69 -0.5 1,084,108 - DvMF_0899 0.70 -0.8 1,084,108 - DvMF_0899 0.70 -0.1 1,084,172 - DvMF_0899 0.78 -0.6 1,084,174 + DvMF_0899 0.79 -0.5 1,084,182 - DvMF_0899 0.80 -0.5 1,084,226 - DvMF_0899 0.85 -1.0 1,084,330 - -1.9 1,084,394 + -0.1 1,084,418 - -1.5 1,084,864 - DvMF_0900 0.35 -0.8 1,084,879 - DvMF_0900 0.36 -1.3 1,085,212 + DvMF_0900 0.67 -0.3 1,085,220 - DvMF_0900 0.67 -0.7 1,086,104 + -0.2 1,086,104 + -0.6 1,086,137 + -1.1 1,086,302 - -0.7
Or see this region's nucleotide sequence