Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0361

Experiment: Defined MoLS4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0360 and DvMF_0361 are separated by 698 nucleotidesDvMF_0361 and DvMF_0362 are separated by 80 nucleotidesDvMF_0362 and DvMF_0363 are separated by 69 nucleotides DvMF_0360: DvMF_0360 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 423,036 to 424,775 _0360 DvMF_0361: DvMF_0361 - LL-diaminopimelate aminotransferase (RefSeq), at 425,474 to 426,643 _0361 DvMF_0362: DvMF_0362 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase (RefSeq), at 426,724 to 427,200 _0362 DvMF_0363: DvMF_0363 - TRASH domain protein (RefSeq), at 427,270 to 427,566 _0363 Position (kb) 425 426 427Strain fitness (log2 ratio) -1 0 1at 424.638 kb on - strandat 424.693 kb on - strandat 424.750 kb on + strandat 425.047 kb on + strandat 425.055 kb on - strandat 426.630 kb on + strandat 427.212 kb on - strandat 427.225 kb on + strandat 427.628 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Defined MoLS4
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424,638 - -1.7
424,693 - -0.5
424,750 + +1.1
425,047 + -1.1
425,055 - -0.2
426,630 + -0.7
427,212 - -0.5
427,225 + -1.2
427,628 - -1.0

Or see this region's nucleotide sequence