Strain Fitness in Shewanella loihica PV-4 around Shew_3635

Experiment: Carbenicillin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.002 mg/ml
4,333,717	+		Shew_3634	0.65	+0.1
4,334,118	+		Shew_3634	0.82	-0.6
4,334,387	+				-1.0
4,334,395	-				-0.7
4,334,404	+				-0.2
4,334,556	+				-1.3
4,334,603	-				-0.6
4,334,618	-				-0.4
4,334,880	+		Shew_3635	0.11	+0.5
4,334,888	-		Shew_3635	0.11	-0.0
4,334,907	-		Shew_3635	0.12	-0.9
4,334,940	+		Shew_3635	0.14	+0.3
4,335,100	+		Shew_3635	0.23	-0.3
4,335,216	+		Shew_3635	0.29	+0.2
4,335,417	-		Shew_3635	0.41	-0.1
4,335,434	-		Shew_3635	0.42	-0.1
4,335,467	-		Shew_3635	0.43	+0.5
4,335,708	-		Shew_3635	0.57	-0.7
4,335,803	+		Shew_3635	0.62	-0.3
4,335,803	+		Shew_3635	0.62	+0.3
4,335,806	-		Shew_3635	0.62	-0.0
4,335,806	-		Shew_3635	0.62	+0.4
4,335,845	+		Shew_3635	0.64	-0.2
4,335,959	+		Shew_3635	0.70	-0.2
4,336,077	+		Shew_3635	0.77	-0.1
4,336,093	-		Shew_3635	0.78	-4.4
4,336,181	+		Shew_3635	0.83	-0.9
4,336,189	-		Shew_3635	0.83	-0.5
4,336,240	-		Shew_3635	0.86	-0.9
4,336,243	+		Shew_3635	0.86	+0.1
4,336,341	-				+0.1
4,336,584	+				+0.1
4,336,584	+				-0.4
4,336,584	+				-0.7
4,336,584	+				+0.4
4,336,584	+				+1.2
4,336,584	+				+0.2
4,336,584	+				-0.4
4,336,592	-				+0.0
4,336,702	-				+0.2
4,336,836	+		Shew_3636	0.22	-0.3
4,336,920	-		Shew_3636	0.40	+0.3
4,337,141	-		Shew_3636	0.86	-0.0
4,337,191	-				-0.8
4,337,367	-				+0.3