Strain Fitness in Shewanella loihica PV-4 around Shew_3187

Experiment: Carbenicillin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.002 mg/ml
3,792,907	+		Shew_3186	0.65	+0.7
3,792,974	+		Shew_3186	0.72	+0.0
3,793,093	+		Shew_3186	0.84	+0.3
3,793,093	+		Shew_3186	0.84	-2.0
3,793,294	-				-0.2
3,793,297	+				-0.1
3,793,297	+				-0.0
3,793,305	-				+0.5
3,793,305	-				+0.2
3,793,366	+				-0.4
3,793,444	+				-0.5
3,793,666	+				+0.8
3,793,814	-				-1.1
3,795,192	+		Shew_3187	0.66	-0.1
3,795,200	-		Shew_3187	0.66	-0.4
3,795,339	-		Shew_3187	0.72	+0.3
3,795,670	+		Shew_3187	0.88	-0.3
3,795,743	-				-0.3
3,795,826	-				-0.7
3,795,909	+				-0.4
3,796,167	+				-0.2
3,796,167	+				+0.5
3,796,175	-				+0.3
3,796,175	-				+0.6
3,796,331	+		Shew_3188	0.15	-0.2
3,796,331	+		Shew_3188	0.15	-0.2
3,796,356	+		Shew_3188	0.17	+1.0
3,796,568	+		Shew_3188	0.35	-0.7
3,796,758	+		Shew_3188	0.51	+0.3
3,796,840	+		Shew_3188	0.57	+0.1
3,796,840	+		Shew_3188	0.57	+2.1
3,796,848	-		Shew_3188	0.58	+0.1
3,796,848	-		Shew_3188	0.58	+0.3
3,796,848	-		Shew_3188	0.58	+0.5
3,796,848	-		Shew_3188	0.58	+0.4
3,796,928	-		Shew_3188	0.65	+0.3