Strain Fitness in Shewanella loihica PV-4 around Shew_0777

Experiment: Carbenicillin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.002 mg/ml
887,184	+				+0.2
887,190	-				-0.5
887,281	-		Shew_0776	0.15	-0.0
887,393	+		Shew_0776	0.36	+0.2
887,401	-		Shew_0776	0.38	-2.1
887,401	-		Shew_0776	0.38	-0.1
887,401	-		Shew_0776	0.38	+0.4
887,401	-		Shew_0776	0.38	+0.1
887,401	-		Shew_0776	0.38	-0.3
887,401	-		Shew_0776	0.38	-1.7
887,420	+		Shew_0776	0.41	+0.1
887,426	+		Shew_0776	0.42	+0.6
887,526	+		Shew_0776	0.61	+0.4
887,526	-		Shew_0776	0.61	+0.7
887,536	-		Shew_0776	0.63	-1.8
887,536	-		Shew_0776	0.63	+0.3
887,536	-		Shew_0776	0.63	+0.1
887,561	-		Shew_0776	0.67	-1.2
887,688	+				-0.3
887,696	-				-0.7
887,906	+				-0.3
888,199	-		Shew_0777	0.27	-3.8
888,218	-		Shew_0777	0.30	-2.5
888,526	-		Shew_0777	0.73	-4.7
888,905	+				-4.1
889,082	-				-1.0
889,245	-				+0.3
889,245	-				+0.2
889,245	-				-0.5
889,245	-				-0.8
889,355	-		Shew_0778	0.13	+0.3
889,480	+		Shew_0778	0.42	-0.2
889,534	+		Shew_0778	0.54	+1.8
889,539	+		Shew_0778	0.55	-0.1
889,655	+		Shew_0778	0.82	+0.9