Experiment: m.b. Cobalt chloride 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1825 and Dshi_1826 are separated by 52 nucleotides Dshi_1826 and Dshi_1827 are separated by 16 nucleotides
Dshi_1825: Dshi_1825 - phosphate acetyltransferase (RefSeq), at 1,904,769 to 1,905,794
_1825
Dshi_1826: Dshi_1826 - protein of unknown function DUF861 cupin_3 (RefSeq), at 1,905,847 to 1,906,206
_1826
Dshi_1827: Dshi_1827 - hypothetical protein (RefSeq), at 1,906,223 to 1,907,263
_1827
Position (kb)
1905
1906
1907 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1904.920 kb on - strand, within Dshi_1825 at 1904.984 kb on - strand, within Dshi_1825 at 1905.073 kb on - strand, within Dshi_1825 at 1905.129 kb on - strand, within Dshi_1825 at 1905.132 kb on - strand, within Dshi_1825 at 1905.200 kb on + strand, within Dshi_1825 at 1905.239 kb on - strand, within Dshi_1825 at 1905.466 kb on + strand, within Dshi_1825 at 1905.474 kb on - strand, within Dshi_1825 at 1905.541 kb on - strand, within Dshi_1825 at 1905.541 kb on - strand, within Dshi_1825 at 1905.572 kb on - strand, within Dshi_1825 at 1905.692 kb on + strand at 1905.796 kb on + strand at 1905.899 kb on - strand, within Dshi_1826 at 1905.974 kb on + strand, within Dshi_1826 at 1906.101 kb on - strand, within Dshi_1826 at 1906.265 kb on + strand at 1906.274 kb on + strand at 1906.398 kb on + strand, within Dshi_1827 at 1906.398 kb on + strand, within Dshi_1827 at 1906.498 kb on + strand, within Dshi_1827 at 1906.552 kb on - strand, within Dshi_1827 at 1906.574 kb on + strand, within Dshi_1827 at 1906.583 kb on + strand, within Dshi_1827 at 1906.583 kb on + strand, within Dshi_1827 at 1906.633 kb on - strand, within Dshi_1827 at 1906.647 kb on - strand, within Dshi_1827 at 1906.862 kb on + strand, within Dshi_1827 at 1906.878 kb on + strand, within Dshi_1827 at 1906.912 kb on - strand, within Dshi_1827 at 1906.945 kb on + strand, within Dshi_1827 at 1906.960 kb on + strand, within Dshi_1827 at 1906.974 kb on - strand, within Dshi_1827 at 1906.974 kb on - strand, within Dshi_1827 at 1906.984 kb on + strand, within Dshi_1827 at 1907.034 kb on + strand, within Dshi_1827 at 1907.043 kb on - strand, within Dshi_1827 at 1907.074 kb on - strand, within Dshi_1827
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.1 mM remove 1,904,920 - Dshi_1825 0.15 +1.7 1,904,984 - Dshi_1825 0.21 +0.0 1,905,073 - Dshi_1825 0.30 +0.6 1,905,129 - Dshi_1825 0.35 -0.0 1,905,132 - Dshi_1825 0.35 -0.0 1,905,200 + Dshi_1825 0.42 -0.9 1,905,239 - Dshi_1825 0.46 -1.9 1,905,466 + Dshi_1825 0.68 +1.0 1,905,474 - Dshi_1825 0.69 -1.1 1,905,541 - Dshi_1825 0.75 -0.7 1,905,541 - Dshi_1825 0.75 -1.3 1,905,572 - Dshi_1825 0.78 +1.6 1,905,692 + -0.4 1,905,796 + -0.3 1,905,899 - Dshi_1826 0.14 -0.4 1,905,974 + Dshi_1826 0.35 +1.4 1,906,101 - Dshi_1826 0.71 +2.5 1,906,265 + +0.3 1,906,274 + -0.7 1,906,398 + Dshi_1827 0.17 +1.3 1,906,398 + Dshi_1827 0.17 -1.1 1,906,498 + Dshi_1827 0.26 -0.7 1,906,552 - Dshi_1827 0.32 +0.7 1,906,574 + Dshi_1827 0.34 +0.7 1,906,583 + Dshi_1827 0.35 +0.5 1,906,583 + Dshi_1827 0.35 -0.7 1,906,633 - Dshi_1827 0.39 +0.5 1,906,647 - Dshi_1827 0.41 -0.6 1,906,862 + Dshi_1827 0.61 -0.5 1,906,878 + Dshi_1827 0.63 -0.7 1,906,912 - Dshi_1827 0.66 -0.1 1,906,945 + Dshi_1827 0.69 -1.9 1,906,960 + Dshi_1827 0.71 -1.1 1,906,974 - Dshi_1827 0.72 +0.1 1,906,974 - Dshi_1827 0.72 +0.7 1,906,984 + Dshi_1827 0.73 -0.4 1,907,034 + Dshi_1827 0.78 -0.9 1,907,043 - Dshi_1827 0.79 -0.2 1,907,074 - Dshi_1827 0.82 -0.9
Or see this region's nucleotide sequence