Experiment: m.b. Cobalt chloride 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0373 and Dshi_0374 are separated by 58 nucleotides Dshi_0374 and Dshi_0375 overlap by 4 nucleotides Dshi_0375 and Dshi_0376 are separated by 143 nucleotides
Dshi_0373: Dshi_0373 - Long-chain-fatty-acid--CoA ligase (RefSeq), at 355,873 to 357,843
_0373
Dshi_0374: Dshi_0374 - hypothetical protein (RefSeq), at 357,902 to 358,156
_0374
Dshi_0375: Dshi_0375 - ABC transporter related (RefSeq), at 358,153 to 358,974
_0375
Dshi_0376: Dshi_0376 - inner-membrane translocator (RefSeq), at 359,118 to 360,107
_0376
Position (kb)
358
359 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 357.160 kb on - strand, within Dshi_0373 at 357.219 kb on - strand, within Dshi_0373 at 357.260 kb on + strand, within Dshi_0373 at 357.285 kb on + strand, within Dshi_0373 at 357.292 kb on + strand, within Dshi_0373 at 357.293 kb on - strand, within Dshi_0373 at 357.533 kb on + strand, within Dshi_0373 at 357.645 kb on + strand, within Dshi_0373 at 357.647 kb on + strand at 357.647 kb on + strand at 357.766 kb on + strand at 357.766 kb on + strand at 357.853 kb on + strand at 357.866 kb on - strand at 357.967 kb on + strand, within Dshi_0374 at 358.281 kb on - strand, within Dshi_0375 at 358.415 kb on - strand, within Dshi_0375 at 358.437 kb on + strand, within Dshi_0375 at 358.500 kb on + strand, within Dshi_0375 at 358.538 kb on + strand, within Dshi_0375 at 358.538 kb on + strand, within Dshi_0375 at 358.690 kb on - strand, within Dshi_0375 at 358.695 kb on - strand, within Dshi_0375 at 358.721 kb on - strand, within Dshi_0375 at 358.836 kb on + strand, within Dshi_0375 at 358.850 kb on + strand, within Dshi_0375 at 358.858 kb on - strand, within Dshi_0375 at 358.869 kb on + strand, within Dshi_0375 at 358.952 kb on + strand at 359.034 kb on - strand at 359.037 kb on + strand at 359.090 kb on + strand at 359.090 kb on + strand at 359.097 kb on + strand at 359.097 kb on + strand at 359.097 kb on + strand at 359.097 kb on + strand at 359.097 kb on + strand at 359.097 kb on + strand at 359.105 kb on - strand at 359.119 kb on + strand at 359.127 kb on - strand at 359.439 kb on - strand, within Dshi_0376 at 359.523 kb on - strand, within Dshi_0376 at 359.528 kb on - strand, within Dshi_0376 at 359.554 kb on + strand, within Dshi_0376 at 359.584 kb on - strand, within Dshi_0376 at 359.597 kb on - strand, within Dshi_0376 at 359.599 kb on + strand, within Dshi_0376 at 359.607 kb on - strand, within Dshi_0376 at 359.680 kb on - strand, within Dshi_0376 at 359.787 kb on + strand, within Dshi_0376 at 359.802 kb on + strand, within Dshi_0376 at 359.922 kb on - strand, within Dshi_0376
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.1 mM remove 357,160 - Dshi_0373 0.65 +0.9 357,219 - Dshi_0373 0.68 -0.3 357,260 + Dshi_0373 0.70 +1.5 357,285 + Dshi_0373 0.72 -0.3 357,292 + Dshi_0373 0.72 -0.1 357,293 - Dshi_0373 0.72 -0.1 357,533 + Dshi_0373 0.84 -0.2 357,645 + Dshi_0373 0.90 +0.1 357,647 + +0.3 357,647 + -1.0 357,766 + -0.4 357,766 + +0.1 357,853 + -0.7 357,866 - +0.5 357,967 + Dshi_0374 0.25 +0.1 358,281 - Dshi_0375 0.16 -0.4 358,415 - Dshi_0375 0.32 -0.1 358,437 + Dshi_0375 0.35 -0.8 358,500 + Dshi_0375 0.42 -1.7 358,538 + Dshi_0375 0.47 +0.1 358,538 + Dshi_0375 0.47 +0.2 358,690 - Dshi_0375 0.65 -0.7 358,695 - Dshi_0375 0.66 -2.3 358,721 - Dshi_0375 0.69 -1.7 358,836 + Dshi_0375 0.83 -0.1 358,850 + Dshi_0375 0.85 -0.7 358,858 - Dshi_0375 0.86 -0.3 358,869 + Dshi_0375 0.87 -0.7 358,952 + -0.1 359,034 - -0.4 359,037 + -0.6 359,090 + -0.1 359,090 + -1.0 359,097 + +1.2 359,097 + -0.4 359,097 + +0.4 359,097 + +0.7 359,097 + -1.4 359,097 + +0.7 359,105 - -1.2 359,119 + +0.9 359,127 - -1.7 359,439 - Dshi_0376 0.32 -0.7 359,523 - Dshi_0376 0.41 +1.2 359,528 - Dshi_0376 0.41 -0.1 359,554 + Dshi_0376 0.44 +0.0 359,584 - Dshi_0376 0.47 +2.9 359,597 - Dshi_0376 0.48 -0.3 359,599 + Dshi_0376 0.49 +2.0 359,607 - Dshi_0376 0.49 +0.9 359,680 - Dshi_0376 0.57 +0.1 359,787 + Dshi_0376 0.68 +2.5 359,802 + Dshi_0376 0.69 +0.1 359,922 - Dshi_0376 0.81 +0.2
Or see this region's nucleotide sequence