Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3952

Experiment: nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 5 mM
4,065,687	+		Ga0059261_3950	0.57	-0.9
4,065,687	+		Ga0059261_3950	0.57	-0.5
4,065,687	+		Ga0059261_3950	0.57	-0.7
4,065,687	+		Ga0059261_3950	0.57	-0.1
4,065,687	+		Ga0059261_3950	0.57	+0.4
4,065,687	+		Ga0059261_3950	0.57	-1.2
4,065,687	+		Ga0059261_3950	0.57	+0.1
4,065,687	+		Ga0059261_3950	0.57	-0.1
4,065,687	+		Ga0059261_3950	0.57	-0.3
4,065,687	+		Ga0059261_3950	0.57	+0.3
4,065,687	+		Ga0059261_3950	0.57	+1.8
4,065,687	+		Ga0059261_3950	0.57	-0.3
4,065,687	+		Ga0059261_3950	0.57	-2.1
4,065,687	+				+0.1
4,065,687	+		Ga0059261_3950	0.57	+0.4
4,065,687	+		Ga0059261_3950	0.57	-0.6
4,065,687	+		Ga0059261_3950	0.57	+0.4
4,065,687	+		Ga0059261_3950	0.57	+0.2
4,065,687	+		Ga0059261_3950	0.57	-1.4
4,065,687	+		Ga0059261_3950	0.57	-0.1
4,065,687	+		Ga0059261_3950	0.57	-1.4
4,065,687	+		Ga0059261_3950	0.57	+1.1
4,065,688	-		Ga0059261_3950	0.57	-0.2
4,065,688	-		Ga0059261_3950	0.57	-0.2
4,065,688	-		Ga0059261_3950	0.57	-0.3
4,065,688	-		Ga0059261_3950	0.57	-0.5
4,065,688	-		Ga0059261_3950	0.57	-0.4
4,065,688	-		Ga0059261_3950	0.57	+0.2
4,065,688	-		Ga0059261_3950	0.57	+0.2
4,065,688	-		Ga0059261_3950	0.57	+0.4
4,065,688	-				+0.5
4,065,688	-				-0.9
4,065,688	-		Ga0059261_3950	0.57	-0.6
4,065,688	-		Ga0059261_3950	0.57	+0.1
4,065,688	-		Ga0059261_3950	0.57	-0.9
4,065,688	-		Ga0059261_3950	0.57	-1.3
4,065,688	-		Ga0059261_3950	0.57	+0.8
4,065,688	-		Ga0059261_3950	0.57	-0.8
4,065,688	-		Ga0059261_3950	0.57	-0.5
4,065,688	-		Ga0059261_3950	0.57	+0.1
4,065,688	-		Ga0059261_3950	0.57	-0.4
4,065,688	-		Ga0059261_3950	0.57	-0.4
4,065,688	-		Ga0059261_3950	0.57	-0.7
4,065,863	+		Ga0059261_3950	0.73	-0.2
4,065,863	+		Ga0059261_3950	0.73	+0.1
4,065,864	-		Ga0059261_3950	0.73	+0.5
4,065,864	-		Ga0059261_3950	0.73	-1.2
4,065,881	+		Ga0059261_3950	0.75	-0.3
4,065,881	+		Ga0059261_3950	0.75	-1.2
4,065,881	+		Ga0059261_3950	0.75	+0.0
4,065,881	+		Ga0059261_3950	0.75	-0.2
4,065,881	+		Ga0059261_3950	0.75	+0.7
4,065,882	-		Ga0059261_3950	0.75	-0.2
4,065,882	-		Ga0059261_3950	0.75	+0.1
4,065,882	-		Ga0059261_3950	0.75	+0.2
4,066,348	+		Ga0059261_3951	0.39	-0.7
4,066,348	+		Ga0059261_3951	0.39	-1.4
4,066,348	+		Ga0059261_3951	0.39	+1.1
4,066,348	+		Ga0059261_3951	0.39	-0.5
4,066,348	+		Ga0059261_3951	0.39	-0.1
4,066,348	+		Ga0059261_3951	0.39	+0.0
4,066,348	+		Ga0059261_3951	0.39	-0.8
4,066,348	+		Ga0059261_3951	0.39	+0.4
4,066,348	+		Ga0059261_3951	0.39	-0.3
4,066,348	+		Ga0059261_3951	0.39	-0.8
4,066,349	-		Ga0059261_3951	0.39	-0.2
4,066,349	-		Ga0059261_3951	0.39	-1.2
4,066,349	-		Ga0059261_3951	0.39	-0.3
4,066,349	-		Ga0059261_3951	0.39	+0.1
4,066,349	-		Ga0059261_3951	0.39	+0.0
4,066,349	-				+1.1
4,066,349	-		Ga0059261_3951	0.39	-1.2
4,066,349	-		Ga0059261_3951	0.39	-0.1
4,066,349	-		Ga0059261_3951	0.39	+0.3
4,066,349	-		Ga0059261_3951	0.39	+0.7
4,066,349	-		Ga0059261_3951	0.39	-0.5
4,066,349	-		Ga0059261_3951	0.39	-0.2
4,066,352	+		Ga0059261_3951	0.40	-0.7
4,066,352	+		Ga0059261_3951	0.40	-0.4
4,066,352	+		Ga0059261_3951	0.40	-1.5
4,066,352	+		Ga0059261_3951	0.40	+0.2
4,066,352	+		Ga0059261_3951	0.40	-0.9
4,066,352	+		Ga0059261_3951	0.40	-0.4
4,066,353	-		Ga0059261_3951	0.40	-0.6
4,066,353	-		Ga0059261_3951	0.40	-0.2
4,066,353	-		Ga0059261_3951	0.40	+0.8
4,066,353	-		Ga0059261_3951	0.40	-0.2
4,066,353	-		Ga0059261_3951	0.40	-0.6
4,066,532	+		Ga0059261_3951	0.75	-1.2
4,066,532	+		Ga0059261_3951	0.75	-0.7
4,066,532	+		Ga0059261_3951	0.75	-0.4
4,066,532	+		Ga0059261_3951	0.75	-0.2
4,066,533	-		Ga0059261_3951	0.75	-0.1
4,066,629	+				-0.7
4,066,673	+				-0.5
4,066,673	+				-0.9
4,066,673	+				-0.5
4,066,673	+				-0.8
4,066,674	-				+1.0
4,066,674	-				-0.3
4,066,674	-				+0.2
4,066,674	-				+0.7
4,066,678	+				-0.4
4,066,678	+				-1.1
4,066,679	-				-0.3
4,066,679	-				-0.5
4,066,684	+				+0.9
4,066,684	+				-0.0
4,066,684	+				-0.3
4,066,684	+				-0.5
4,066,685	-				+0.1
4,066,685	-				+1.7
4,066,685	-				-0.0
4,066,852	+		Ga0059261_3952	0.14	-0.4
4,066,852	+		Ga0059261_3952	0.14	-0.2
4,066,853	-		Ga0059261_3952	0.14	-0.1
4,067,141	-		Ga0059261_3952	0.33	+0.1
4,067,161	-		Ga0059261_3952	0.35	+2.1
4,067,426	-		Ga0059261_3952	0.53	+0.7
4,067,426	-		Ga0059261_3952	0.53	-0.5
4,067,463	+		Ga0059261_3952	0.55	-1.5
4,067,463	+		Ga0059261_3952	0.55	-1.8
4,067,464	-		Ga0059261_3952	0.55	+0.2
4,067,464	-		Ga0059261_3952	0.55	+2.1
4,067,492	-		Ga0059261_3952	0.57	-0.9
4,067,679	+		Ga0059261_3952	0.70	-0.1
4,067,679	+		Ga0059261_3952	0.70	-1.7
4,067,679	+		Ga0059261_3952	0.70	+0.6
4,067,679	+		Ga0059261_3952	0.70	-1.3
4,067,679	+		Ga0059261_3952	0.70	+0.3
4,067,679	+		Ga0059261_3952	0.70	-0.0
4,067,679	+		Ga0059261_3952	0.70	+0.2
4,067,679	+		Ga0059261_3952	0.70	-0.0
4,067,679	+		Ga0059261_3952	0.70	-0.0
4,067,680	-		Ga0059261_3952	0.70	-0.7
4,067,680	-		Ga0059261_3952	0.70	+0.5
4,067,680	-		Ga0059261_3952	0.70	-0.1
4,067,680	-		Ga0059261_3952	0.70	+0.0
4,067,680	-		Ga0059261_3952	0.70	-0.6
4,067,680	-		Ga0059261_3952	0.70	-1.5
4,067,735	-		Ga0059261_3952	0.74	-0.2
4,067,789	+		Ga0059261_3952	0.78	+1.7
4,067,789	+		Ga0059261_3952	0.78	-0.9
4,067,789	+		Ga0059261_3952	0.78	+0.1
4,067,789	+		Ga0059261_3952	0.78	-1.2
4,067,789	+		Ga0059261_3952	0.78	+0.3
4,067,789	+				+0.1
4,067,790	-		Ga0059261_3952	0.78	+2.1
4,067,790	-		Ga0059261_3952	0.78	-0.2
4,067,935	+		Ga0059261_3952	0.88	-0.6
4,067,935	+		Ga0059261_3952	0.88	+1.1
4,067,936	-		Ga0059261_3952	0.88	-1.5
4,068,467	+		Ga0059261_3953	0.29	-0.2
4,068,467	+		Ga0059261_3953	0.29	-0.2
4,068,468	-		Ga0059261_3953	0.29	+1.6
4,068,468	-		Ga0059261_3953	0.29	-0.0
4,068,484	+		Ga0059261_3953	0.30	-0.0
4,068,484	+		Ga0059261_3953	0.30	-1.2
4,068,485	-		Ga0059261_3953	0.30	-0.3
4,068,516	+		Ga0059261_3953	0.33	-0.7
4,068,636	+		Ga0059261_3953	0.42	-0.7
4,068,636	+		Ga0059261_3953	0.42	+0.3
4,068,637	-		Ga0059261_3953	0.42	-0.7
4,068,690	+		Ga0059261_3953	0.47	+1.1
4,068,690	+		Ga0059261_3953	0.47	-0.8
4,068,690	+		Ga0059261_3953	0.47	-0.2
4,068,690	+		Ga0059261_3953	0.47	-0.7
4,068,690	+		Ga0059261_3953	0.47	-0.2
4,068,690	+				+0.5
4,068,690	+		Ga0059261_3953	0.47	+0.5
4,068,690	+		Ga0059261_3953	0.47	-0.3
4,068,690	+		Ga0059261_3953	0.47	+1.0
4,068,690	+		Ga0059261_3953	0.47	-0.6
4,068,691	-		Ga0059261_3953	0.47	-0.1
4,068,691	-		Ga0059261_3953	0.47	+0.1
4,068,691	-		Ga0059261_3953	0.47	-1.0
4,068,691	-		Ga0059261_3953	0.47	-0.3
4,068,691	-		Ga0059261_3953	0.47	+0.8
4,068,691	-		Ga0059261_3953	0.47	-1.3
4,068,691	-		Ga0059261_3953	0.47	-0.4
4,068,798	+		Ga0059261_3953	0.56	+1.0
4,068,798	+		Ga0059261_3953	0.56	-0.9
4,068,798	+		Ga0059261_3953	0.56	+0.1
4,068,798	+		Ga0059261_3953	0.56	-0.1
4,068,798	+		Ga0059261_3953	0.56	-0.2
4,068,798	+		Ga0059261_3953	0.56	-0.7
4,068,798	+				+1.1
4,068,798	+		Ga0059261_3953	0.56	+0.3
4,068,798	+		Ga0059261_3953	0.56	+0.1
4,068,799	-		Ga0059261_3953	0.56	+0.4
4,068,799	-		Ga0059261_3953	0.56	-0.8
4,068,799	-		Ga0059261_3953	0.56	+0.6
4,068,799	-		Ga0059261_3953	0.56	-0.2
4,068,799	-		Ga0059261_3953	0.56	+0.3
4,068,799	-		Ga0059261_3953	0.56	+0.2
4,068,834	+		Ga0059261_3953	0.59	-2.1
4,068,834	+		Ga0059261_3953	0.59	-1.0
4,068,834	+		Ga0059261_3953	0.59	-0.2
4,068,834	+		Ga0059261_3953	0.59	-0.3
4,068,834	+		Ga0059261_3953	0.59	-0.3
4,068,834	+		Ga0059261_3953	0.59	-0.2
4,068,834	+		Ga0059261_3953	0.59	+0.4
4,068,835	-		Ga0059261_3953	0.59	+0.0
4,068,835	-		Ga0059261_3953	0.59	+2.2
4,068,835	-		Ga0059261_3953	0.59	+0.7
4,068,835	-		Ga0059261_3953	0.59	-0.6
4,068,835	-		Ga0059261_3953	0.59	+0.8
4,068,835	-		Ga0059261_3953	0.59	+0.1
4,068,926	+		Ga0059261_3953	0.66	+0.0
4,068,926	+		Ga0059261_3953	0.66	+0.4
4,068,927	-		Ga0059261_3953	0.66	-0.0
4,068,927	-		Ga0059261_3953	0.66	+1.4