Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3339

Experiment: nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 5 mM
3,469,233	+		Ga0059261_3338	0.21	-0.4
3,469,233	+		Ga0059261_3338	0.21	+0.9
3,469,234	-		Ga0059261_3338	0.21	-0.6
3,469,281	+		Ga0059261_3338	0.25	-0.6
3,469,281	+		Ga0059261_3338	0.25	+0.8
3,469,281	+		Ga0059261_3338	0.25	-0.5
3,469,281	+		Ga0059261_3338	0.25	-0.6
3,469,281	+		Ga0059261_3338	0.25	+0.3
3,469,281	+		Ga0059261_3338	0.25	-0.4
3,469,281	+		Ga0059261_3338	0.25	-1.2
3,469,281	+		Ga0059261_3338	0.25	-0.0
3,469,281	+		Ga0059261_3338	0.25	-0.5
3,469,281	+		Ga0059261_3338	0.25	+0.1
3,469,281	+		Ga0059261_3338	0.25	-0.9
3,469,281	+		Ga0059261_3338	0.25	-0.6
3,469,281	+		Ga0059261_3338	0.25	+0.4
3,469,281	+		Ga0059261_3338	0.25	+0.2
3,469,281	+		Ga0059261_3338	0.25	+0.1
3,469,282	-		Ga0059261_3338	0.26	-0.4
3,469,282	-		Ga0059261_3338	0.26	+0.1
3,469,282	-		Ga0059261_3338	0.26	+0.5
3,469,282	-		Ga0059261_3338	0.26	-0.0
3,469,282	-		Ga0059261_3338	0.26	+0.3
3,469,282	-		Ga0059261_3338	0.26	-0.4
3,469,282	-		Ga0059261_3338	0.26	+0.1
3,469,282	-		Ga0059261_3338	0.26	-0.7
3,469,491	+		Ga0059261_3338	0.46	-0.3
3,469,491	+		Ga0059261_3338	0.46	-0.8
3,469,491	+		Ga0059261_3338	0.46	-0.3
3,469,491	+		Ga0059261_3338	0.46	+0.1
3,469,491	+				+2.7
3,469,491	+		Ga0059261_3338	0.46	+0.3
3,469,491	+		Ga0059261_3338	0.46	-0.2
3,469,491	+		Ga0059261_3338	0.46	+0.1
3,469,491	+		Ga0059261_3338	0.46	-0.6
3,469,491	+		Ga0059261_3338	0.46	+0.5
3,469,492	-		Ga0059261_3338	0.46	-0.2
3,469,492	-		Ga0059261_3338	0.46	-1.3
3,469,492	-		Ga0059261_3338	0.46	+0.2
3,469,492	-		Ga0059261_3338	0.46	-0.4
3,469,492	-		Ga0059261_3338	0.46	-0.6
3,469,492	-		Ga0059261_3338	0.46	+0.1
3,469,663	-		Ga0059261_3338	0.63	+0.8
3,469,663	-		Ga0059261_3338	0.63	-0.3
3,469,663	-		Ga0059261_3338	0.63	+0.9
3,469,663	-		Ga0059261_3338	0.63	+0.0
3,469,761	+		Ga0059261_3338	0.73	-0.6
3,469,762	-		Ga0059261_3338	0.73	-1.1
3,469,762	-		Ga0059261_3338	0.73	+0.8
3,469,807	+		Ga0059261_3338	0.77	-0.4
3,469,934	-		Ga0059261_3338	0.90	-0.4
3,469,934	-		Ga0059261_3338	0.90	-1.0
3,469,934	-		Ga0059261_3338	0.90	-0.4
3,469,934	-		Ga0059261_3338	0.90	+0.1
3,470,007	-				+0.3
3,470,090	+				-2.3
3,470,091	-				-0.7
3,470,118	+				+0.1
3,470,141	+				+0.6
3,470,142	-				-1.4
3,470,244	+		Ga0059261_3339	0.13	+0.4
3,470,346	+		Ga0059261_3339	0.21	-1.0
3,470,346	+		Ga0059261_3339	0.21	-1.2
3,470,346	+		Ga0059261_3339	0.21	-1.7
3,470,347	-		Ga0059261_3339	0.21	+0.6
3,470,347	-		Ga0059261_3339	0.21	-2.0
3,470,347	-		Ga0059261_3339	0.21	-0.1
3,470,347	-		Ga0059261_3339	0.21	-2.0
3,470,347	-		Ga0059261_3339	0.21	-0.6
3,470,347	-		Ga0059261_3339	0.21	-0.9
3,470,347	-		Ga0059261_3339	0.21	-0.3
3,470,347	-		Ga0059261_3339	0.21	-1.5
3,470,348	+		Ga0059261_3339	0.21	-0.7
3,470,348	+		Ga0059261_3339	0.21	-0.4
3,470,348	+		Ga0059261_3339	0.21	-0.6
3,470,348	+		Ga0059261_3339	0.21	-1.9
3,470,349	-		Ga0059261_3339	0.21	+0.1
3,470,349	-		Ga0059261_3339	0.21	-1.0
3,470,349	-		Ga0059261_3339	0.21	-0.8
3,470,349	-		Ga0059261_3339	0.21	-1.0
3,470,349	-				+0.1
3,470,349	-		Ga0059261_3339	0.21	-1.3
3,470,508	+		Ga0059261_3339	0.33	-0.6
3,470,531	+		Ga0059261_3339	0.35	+0.1
3,470,531	+		Ga0059261_3339	0.35	-0.5
3,470,531	+		Ga0059261_3339	0.35	-0.6
3,470,532	-		Ga0059261_3339	0.35	-1.4
3,470,551	-		Ga0059261_3339	0.36	-1.0
3,470,882	+		Ga0059261_3339	0.62	-0.3
3,471,098	+		Ga0059261_3339	0.79	-1.7
3,471,319	-				+0.1
3,471,409	+				-0.3
3,471,409	+				-0.2
3,471,410	-				+0.5
3,471,410	-				-0.2
3,471,482	-				-2.1
3,471,534	-		Ga0059261_3340	0.14	-1.7
3,471,701	-		Ga0059261_3340	0.29	-0.3
3,471,701	-		Ga0059261_3340	0.29	-1.1
3,471,701	-		Ga0059261_3340	0.29	-0.2
3,471,778	+		Ga0059261_3340	0.37	-2.2
3,471,779	-		Ga0059261_3340	0.37	-0.1
3,471,889	+		Ga0059261_3340	0.47	-1.0
3,471,889	+		Ga0059261_3340	0.47	-0.4
3,471,890	-		Ga0059261_3340	0.47	-1.9
3,471,890	-		Ga0059261_3340	0.47	-1.2
3,471,989	-				-1.4
3,471,989	-		Ga0059261_3340	0.57	-0.7
3,472,073	+		Ga0059261_3340	0.65	+0.0
3,472,075	+		Ga0059261_3340	0.65	+1.0
3,472,075	+		Ga0059261_3340	0.65	-2.2
3,472,075	+		Ga0059261_3340	0.65	-2.2
3,472,075	+		Ga0059261_3340	0.65	+0.6
3,472,075	+		Ga0059261_3340	0.65	-0.7
3,472,076	-		Ga0059261_3340	0.65	-0.0
3,472,076	-		Ga0059261_3340	0.65	+0.4
3,472,076	-		Ga0059261_3340	0.65	-1.4
3,472,076	-		Ga0059261_3340	0.65	-0.2
3,472,076	-		Ga0059261_3340	0.65	-2.0
3,472,076	-		Ga0059261_3340	0.65	-2.6
3,472,076	-		Ga0059261_3340	0.65	-0.4
3,472,076	-		Ga0059261_3340	0.65	-1.0
3,472,264	+		Ga0059261_3340	0.83	-2.8
3,472,264	+		Ga0059261_3340	0.83	-1.6
3,472,265	-		Ga0059261_3340	0.83	-0.4