Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2636

Experiment: nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 5 mM
2,729,464	+		Ga0059261_2635	0.26	-0.4
2,729,464	+		Ga0059261_2635	0.26	-0.2
2,729,464	+		Ga0059261_2635	0.26	-0.5
2,729,464	+		Ga0059261_2635	0.26	-0.6
2,729,465	-		Ga0059261_2635	0.26	+0.1
2,729,488	+		Ga0059261_2635	0.28	+0.3
2,729,503	+		Ga0059261_2635	0.30	-0.4
2,729,503	+		Ga0059261_2635	0.30	+1.3
2,729,503	+		Ga0059261_2635	0.30	+0.6
2,729,503	+		Ga0059261_2635	0.30	+0.3
2,729,503	+		Ga0059261_2635	0.30	-0.3
2,729,503	+		Ga0059261_2635	0.30	+0.0
2,729,503	+		Ga0059261_2635	0.30	+0.0
2,729,503	+		Ga0059261_2635	0.30	+0.3
2,729,503	+		Ga0059261_2635	0.30	-0.2
2,729,504	-		Ga0059261_2635	0.30	+0.7
2,729,506	+		Ga0059261_2635	0.30	-0.3
2,729,506	+		Ga0059261_2635	0.30	-0.7
2,729,506	+		Ga0059261_2635	0.30	-0.2
2,729,507	-		Ga0059261_2635	0.30	-0.1
2,729,507	-		Ga0059261_2635	0.30	+0.3
2,729,507	-		Ga0059261_2635	0.30	-0.3
2,729,507	-		Ga0059261_2635	0.30	-0.2
2,729,507	-		Ga0059261_2635	0.30	+0.9
2,729,596	+		Ga0059261_2635	0.37	+1.3
2,729,596	+		Ga0059261_2635	0.37	-0.0
2,729,596	+		Ga0059261_2635	0.37	-0.6
2,729,597	-		Ga0059261_2635	0.37	-0.2
2,729,597	-		Ga0059261_2635	0.37	-0.3
2,729,597	-		Ga0059261_2635	0.37	-0.7
2,729,597	-		Ga0059261_2635	0.37	+1.0
2,729,638	+				+0.3
2,729,638	+				+1.3
2,729,638	+		Ga0059261_2635	0.41	+0.5
2,729,639	-		Ga0059261_2635	0.41	+0.8
2,729,639	-		Ga0059261_2635	0.41	-1.6
2,729,800	+		Ga0059261_2635	0.54	+0.3
2,729,800	+		Ga0059261_2635	0.54	+0.3
2,729,800	+		Ga0059261_2635	0.54	+0.3
2,729,800	+		Ga0059261_2635	0.54	+0.4
2,729,800	+		Ga0059261_2635	0.54	+0.8
2,729,800	+		Ga0059261_2635	0.54	-0.2
2,729,800	+		Ga0059261_2635	0.54	+0.2
2,729,800	+		Ga0059261_2635	0.54	-0.0
2,729,800	+		Ga0059261_2635	0.54	+0.3
2,729,800	+		Ga0059261_2635	0.54	+0.4
2,729,800	+		Ga0059261_2635	0.54	-0.6
2,729,801	-		Ga0059261_2635	0.54	-0.1
2,729,801	-		Ga0059261_2635	0.54	+0.3
2,729,801	-		Ga0059261_2635	0.54	-0.1
2,729,801	-		Ga0059261_2635	0.54	-0.3
2,729,801	-		Ga0059261_2635	0.54	+0.1
2,729,830	+		Ga0059261_2635	0.57	+0.1
2,729,830	+		Ga0059261_2635	0.57	-0.9
2,729,830	+		Ga0059261_2635	0.57	+0.1
2,729,830	+		Ga0059261_2635	0.57	+2.8
2,729,830	+		Ga0059261_2635	0.57	-0.4
2,729,831	-		Ga0059261_2635	0.57	-0.6
2,729,831	-		Ga0059261_2635	0.57	-0.7
2,729,831	-		Ga0059261_2635	0.57	-1.0
2,729,831	-		Ga0059261_2635	0.57	+1.3
2,729,831	-		Ga0059261_2635	0.57	+0.1
2,729,908	+		Ga0059261_2635	0.63	-1.1
2,729,909	-		Ga0059261_2635	0.63	+0.5
2,729,909	-		Ga0059261_2635	0.63	+0.3
2,729,909	-		Ga0059261_2635	0.63	+0.5
2,729,909	-		Ga0059261_2635	0.63	+0.5
2,729,917	+		Ga0059261_2635	0.64	+0.6
2,729,918	-		Ga0059261_2635	0.64	-1.7
2,729,918	-		Ga0059261_2635	0.64	+0.5
2,730,133	+		Ga0059261_2635	0.82	+0.0
2,730,133	+		Ga0059261_2635	0.82	+0.6
2,730,133	+		Ga0059261_2635	0.82	-1.1
2,730,133	+		Ga0059261_2635	0.82	-0.9
2,730,133	+		Ga0059261_2635	0.82	+0.1
2,730,133	+		Ga0059261_2635	0.82	-0.2
2,730,133	+				-1.1
2,730,134	-		Ga0059261_2635	0.82	-0.3
2,730,134	-		Ga0059261_2635	0.82	+0.6
2,730,134	-		Ga0059261_2635	0.82	+0.3
2,730,134	-		Ga0059261_2635	0.82	-0.1
2,730,134	-		Ga0059261_2635	0.82	-0.3
2,730,134	-		Ga0059261_2635	0.82	-0.9
2,730,134	-		Ga0059261_2635	0.82	-0.1
2,730,134	-		Ga0059261_2635	0.82	-1.2
2,730,134	-		Ga0059261_2635	0.82	-0.3
2,730,139	+		Ga0059261_2635	0.82	-1.6
2,730,139	+		Ga0059261_2635	0.82	+0.6
2,730,139	+				-0.3
2,730,139	+		Ga0059261_2635	0.82	+0.5
2,730,139	+		Ga0059261_2635	0.82	-0.3
2,730,140	-		Ga0059261_2635	0.82	-0.1
2,730,140	-		Ga0059261_2635	0.82	+0.1
2,730,140	-		Ga0059261_2635	0.82	+0.2
2,730,140	-		Ga0059261_2635	0.82	-0.6
2,730,140	-		Ga0059261_2635	0.82	-0.2
2,730,140	-		Ga0059261_2635	0.82	+0.5
2,730,140	-		Ga0059261_2635	0.82	-0.0
2,730,140	-		Ga0059261_2635	0.82	+0.0
2,730,462	+				-0.0
2,730,462	+				+0.0
2,730,462	+				-0.1
2,730,462	+				-0.1
2,730,462	+				+1.7
2,730,462	+				-0.3
2,730,462	+				-0.7
2,730,463	-				-0.7
2,730,463	-				+0.1
2,730,463	-				-0.1
2,730,463	-				+0.5
2,730,463	-				-0.3
2,730,463	-				+0.3
2,730,463	-				-0.4
2,730,463	-				-1.3
2,730,565	-		Ga0059261_2636	0.22	-0.1
2,730,615	+				-0.3
2,730,615	+		Ga0059261_2636	0.28	+0.1
2,730,615	+		Ga0059261_2636	0.28	+0.4
2,730,615	+		Ga0059261_2636	0.28	-0.6
2,730,615	+		Ga0059261_2636	0.28	-0.3
2,730,615	+		Ga0059261_2636	0.28	-0.5
2,730,615	+		Ga0059261_2636	0.28	-0.8
2,730,615	+		Ga0059261_2636	0.28	-0.7
2,730,616	-		Ga0059261_2636	0.28	-1.0
2,730,616	-		Ga0059261_2636	0.28	+1.0
2,730,616	-		Ga0059261_2636	0.28	+0.3
2,730,616	-		Ga0059261_2636	0.28	-0.3
2,730,616	-		Ga0059261_2636	0.28	-0.2
2,730,616	-		Ga0059261_2636	0.28	+0.5
2,730,616	-		Ga0059261_2636	0.28	+0.3
2,730,616	-		Ga0059261_2636	0.28	-0.3
2,730,757	+		Ga0059261_2636	0.44	+0.3
2,730,757	+		Ga0059261_2636	0.44	+0.4
2,730,757	+		Ga0059261_2636	0.44	+0.5
2,730,757	+		Ga0059261_2636	0.44	-0.7
2,730,758	-		Ga0059261_2636	0.44	+0.5
2,730,758	-		Ga0059261_2636	0.44	+0.7
2,730,758	-		Ga0059261_2636	0.44	-0.3
2,730,758	-		Ga0059261_2636	0.44	+0.0
2,730,758	-		Ga0059261_2636	0.44	-0.3
2,730,825	+		Ga0059261_2636	0.52	-0.1
2,730,825	+		Ga0059261_2636	0.52	+0.5
2,730,825	+		Ga0059261_2636	0.52	-0.6
2,730,825	+		Ga0059261_2636	0.52	+1.5
2,730,825	+		Ga0059261_2636	0.52	+1.0
2,730,825	+		Ga0059261_2636	0.52	+0.2
2,730,825	+		Ga0059261_2636	0.52	+0.2
2,730,825	+		Ga0059261_2636	0.52	+0.1
2,730,826	-		Ga0059261_2636	0.52	+0.7
2,731,013	+		Ga0059261_2636	0.74	+0.8
2,731,053	+		Ga0059261_2636	0.79	-0.2
2,731,053	+		Ga0059261_2636	0.79	+0.3
2,731,054	-		Ga0059261_2636	0.79	+0.1
2,731,054	-		Ga0059261_2636	0.79	+0.2
2,731,054	-		Ga0059261_2636	0.79	+0.7
2,731,054	-				+0.3
2,731,146	+		Ga0059261_2636	0.90	+0.0
2,731,147	-				-0.0
2,731,384	+		Ga0059261_2637	0.22	-0.4
2,731,384	+		Ga0059261_2637	0.22	+0.4
2,731,385	-		Ga0059261_2637	0.23	+0.3
2,731,385	-		Ga0059261_2637	0.23	+0.8
2,731,517	+		Ga0059261_2637	0.40	+0.3
2,731,517	+		Ga0059261_2637	0.40	-1.0
2,731,614	-		Ga0059261_2637	0.53	+0.4
2,731,676	+		Ga0059261_2637	0.62	+0.2
2,731,677	-				+1.8
2,731,744	+		Ga0059261_2637	0.71	+0.1
2,731,744	+		Ga0059261_2637	0.71	-1.1
2,731,744	+		Ga0059261_2637	0.71	-0.6
2,731,744	+		Ga0059261_2637	0.71	-0.0
2,731,744	+		Ga0059261_2637	0.71	+0.4
2,731,744	+		Ga0059261_2637	0.71	+0.5
2,731,744	+		Ga0059261_2637	0.71	-0.3
2,731,744	+		Ga0059261_2637	0.71	-0.3
2,731,744	+		Ga0059261_2637	0.71	+0.7
2,731,744	+		Ga0059261_2637	0.71	-0.6
2,731,744	+		Ga0059261_2637	0.71	+0.0
2,731,744	+		Ga0059261_2637	0.71	-0.5
2,731,744	+		Ga0059261_2637	0.71	-0.2
2,731,744	+		Ga0059261_2637	0.71	+0.3
2,731,745	-		Ga0059261_2637	0.71	-0.1
2,731,745	-		Ga0059261_2637	0.71	+0.5
2,731,745	-		Ga0059261_2637	0.71	+0.0
2,731,745	-		Ga0059261_2637	0.71	+0.5
2,731,745	-		Ga0059261_2637	0.71	+0.4
2,731,745	-		Ga0059261_2637	0.71	-1.7
2,731,745	-		Ga0059261_2637	0.71	-1.0
2,731,745	-		Ga0059261_2637	0.71	+0.8
2,731,745	-		Ga0059261_2637	0.71	-0.0
2,731,745	-		Ga0059261_2637	0.71	+0.0
2,731,745	-		Ga0059261_2637	0.71	-0.5
2,731,745	-		Ga0059261_2637	0.71	-0.3
2,731,747	+		Ga0059261_2637	0.71	-0.2
2,731,747	+		Ga0059261_2637	0.71	+0.2
2,731,748	-		Ga0059261_2637	0.71	+0.1
2,731,748	-		Ga0059261_2637	0.71	-0.7
2,731,748	-		Ga0059261_2637	0.71	+0.6
2,731,748	-		Ga0059261_2637	0.71	-0.7
2,731,814	-		Ga0059261_2637	0.80	+0.7
2,731,955	+				+0.2
2,731,955	+				-0.9
2,731,955	+				+0.5
2,731,955	+				-0.0
2,731,956	-				+2.1
2,731,956	-				-0.6
2,732,026	-				+0.4
2,732,094	+		Ga0059261_2638	0.14	-0.0
2,732,095	-		Ga0059261_2638	0.15	+0.4
2,732,109	+		Ga0059261_2638	0.16	-0.8
2,732,109	+		Ga0059261_2638	0.16	+1.0
2,732,109	+				+0.7
2,732,109	+		Ga0059261_2638	0.16	-0.1
2,732,109	+		Ga0059261_2638	0.16	-0.7
2,732,110	-		Ga0059261_2638	0.16	+0.9
2,732,110	-		Ga0059261_2638	0.16	+0.8
2,732,137	+		Ga0059261_2638	0.19	-0.6
2,732,137	+		Ga0059261_2638	0.19	+0.6
2,732,137	+		Ga0059261_2638	0.19	-0.3
2,732,137	+		Ga0059261_2638	0.19	+0.7
2,732,137	+		Ga0059261_2638	0.19	-0.8
2,732,138	-		Ga0059261_2638	0.19	-0.1
2,732,138	-		Ga0059261_2638	0.19	+0.7
2,732,153	+		Ga0059261_2638	0.21	-0.9
2,732,153	+		Ga0059261_2638	0.21	+0.3