Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2344

Experiment: nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 5 mM
2,449,723	+		Ga0059261_2340	0.77	-0.0
2,449,745	+		Ga0059261_2340	0.79	-1.0
2,449,745	+		Ga0059261_2340	0.79	-0.1
2,449,745	+		Ga0059261_2340	0.79	+0.1
2,449,745	+		Ga0059261_2340	0.79	+0.4
2,449,745	+		Ga0059261_2340	0.79	-0.8
2,449,745	+				+0.7
2,449,746	-				+1.0
2,449,746	-		Ga0059261_2340	0.79	-0.2
2,449,746	-		Ga0059261_2340	0.79	+0.2
2,449,746	-		Ga0059261_2340	0.79	+0.1
2,449,746	-		Ga0059261_2340	0.79	+0.6
2,449,785	+		Ga0059261_2340	0.82	-0.5
2,449,785	+		Ga0059261_2340	0.82	-2.1
2,449,786	-		Ga0059261_2340	0.82	-2.2
2,449,866	+		Ga0059261_2340	0.90	-1.3
2,449,911	+				-0.8
2,449,911	+				-0.3
2,449,911	+				-0.3
2,449,911	+				-0.0
2,449,911	+				+0.4
2,449,938	+				-0.0
2,449,944	+				+0.1
2,449,944	+				+0.5
2,449,944	+				-1.2
2,449,944	+				+0.7
2,449,944	+				+1.4
2,449,944	+				-0.5
2,449,945	-				-1.2
2,449,945	-				-0.3
2,449,945	-				+0.3
2,449,945	-				+0.8
2,449,945	-				+0.7
2,449,945	-				+1.0
2,449,945	-				-0.2
2,449,945	-				-1.1
2,449,945	-				+0.3
2,449,947	+				+0.0
2,449,947	+				+0.1
2,449,947	+				-0.0
2,449,948	-				-0.4
2,449,948	-				-0.9
2,449,948	-				-0.3
2,449,948	-				+0.4
2,449,948	-				+0.5
2,449,961	-				+0.1
2,449,966	+				-0.9
2,449,966	+				+0.4
2,449,966	+				-0.0
2,449,966	+				-0.4
2,449,966	+				+0.8
2,449,967	-				+0.7
2,449,968	+				-0.4
2,449,968	+				-0.2
2,449,968	+				-0.0
2,449,969	-				+0.2
2,449,969	-				+0.0
2,449,969	-				+0.1
2,449,969	-				-1.8
2,449,969	-				-1.2
2,450,058	+		Ga0059261_2341	0.30	-0.4
2,450,058	+		Ga0059261_2341	0.30	-0.9
2,450,059	-		Ga0059261_2341	0.31	+2.0
2,450,059	-		Ga0059261_2341	0.31	+1.2
2,450,120	+		Ga0059261_2341	0.53	-0.2
2,450,120	+		Ga0059261_2341	0.53	-0.1
2,450,145	+		Ga0059261_2341	0.62	-0.1
2,450,145	+		Ga0059261_2341	0.62	+0.1
2,450,145	+		Ga0059261_2341	0.62	+0.6
2,450,145	+		Ga0059261_2341	0.62	+0.6
2,450,145	+		Ga0059261_2341	0.62	-1.7
2,450,145	+		Ga0059261_2341	0.62	+1.3
2,450,145	+		Ga0059261_2341	0.62	+0.9
2,450,145	+		Ga0059261_2341	0.62	+0.3
2,450,145	+		Ga0059261_2341	0.62	+0.2
2,450,145	+		Ga0059261_2341	0.62	+0.7
2,450,145	+		Ga0059261_2341	0.62	-0.4
2,450,146	-		Ga0059261_2341	0.63	-0.5
2,450,146	-		Ga0059261_2341	0.63	-0.2
2,450,146	-		Ga0059261_2341	0.63	-0.3
2,450,146	-		Ga0059261_2341	0.63	+2.4
2,450,146	-		Ga0059261_2341	0.63	-0.8
2,450,146	-		Ga0059261_2341	0.63	+2.1
2,450,146	-		Ga0059261_2341	0.63	-0.5
2,450,147	+		Ga0059261_2341	0.63	-2.1
2,450,147	+		Ga0059261_2341	0.63	-0.2
2,450,147	+		Ga0059261_2341	0.63	+0.0
2,450,147	+		Ga0059261_2341	0.63	+0.5
2,450,147	+		Ga0059261_2341	0.63	+0.2
2,450,148	-		Ga0059261_2341	0.63	+0.3
2,450,148	-		Ga0059261_2341	0.63	-1.1
2,450,148	-		Ga0059261_2341	0.63	-0.5
2,450,260	+				-0.2
2,450,260	+				-0.7
2,450,261	-				+1.8
2,450,281	+		Ga0059261_2342	0.21	-1.4
2,450,281	+		Ga0059261_2342	0.21	-0.1
2,450,281	+		Ga0059261_2342	0.21	-0.1
2,450,281	+		Ga0059261_2342	0.21	+2.0
2,450,282	-		Ga0059261_2342	0.21	+0.2
2,450,282	-		Ga0059261_2342	0.21	-0.1
2,450,282	-		Ga0059261_2342	0.21	+0.3
2,450,282	-		Ga0059261_2342	0.21	+0.3
2,450,386	+		Ga0059261_2342	0.79	-0.6
2,450,387	-		Ga0059261_2342	0.79	+0.5
2,450,402	+		Ga0059261_2342	0.88	+0.7
2,450,402	+		Ga0059261_2342	0.88	+1.4
2,450,402	+		Ga0059261_2342	0.88	+1.2
2,450,402	+		Ga0059261_2342	0.88	+1.4
2,450,402	+		Ga0059261_2342	0.88	+1.5
2,450,402	+		Ga0059261_2342	0.88	-0.5
2,450,403	-		Ga0059261_2342	0.88	-0.1
2,450,403	-		Ga0059261_2342	0.88	+1.4
2,450,403	-		Ga0059261_2342	0.88	+0.1
2,450,458	+				-0.3
2,450,459	-				+0.2
2,450,519	+		Ga0059261_2343	0.17	+0.1
2,450,519	+		Ga0059261_2343	0.17	+0.7
2,450,519	+		Ga0059261_2343	0.17	-0.4
2,450,519	+		Ga0059261_2343	0.17	+0.8
2,450,519	+		Ga0059261_2343	0.17	+0.1
2,450,519	+		Ga0059261_2343	0.17	-0.7
2,450,520	-		Ga0059261_2343	0.17	-0.1
2,450,520	-		Ga0059261_2343	0.17	+0.4
2,450,520	-		Ga0059261_2343	0.17	+0.1
2,450,522	+		Ga0059261_2343	0.18	+0.3
2,450,670	+		Ga0059261_2343	0.88	-0.4
2,450,670	+		Ga0059261_2343	0.88	-1.1
2,450,670	+		Ga0059261_2343	0.88	-0.4
2,450,670	+		Ga0059261_2343	0.88	+0.1
2,450,670	+		Ga0059261_2343	0.88	-0.3
2,450,670	+		Ga0059261_2343	0.88	+0.8
2,450,671	-		Ga0059261_2343	0.88	+0.4
2,450,671	-		Ga0059261_2343	0.88	-0.1
2,450,671	-		Ga0059261_2343	0.88	-0.2
2,450,671	-		Ga0059261_2343	0.88	-0.4
2,450,671	-		Ga0059261_2343	0.88	+1.4
2,450,693	+				+0.8
2,450,693	+				-0.3
2,450,979	+		Ga0059261_2344	0.40	-0.5
2,450,980	-		Ga0059261_2344	0.40	+1.3
2,450,999	+		Ga0059261_2344	0.43	-0.1
2,450,999	+		Ga0059261_2344	0.43	-0.1
2,450,999	+		Ga0059261_2344	0.43	-1.0
2,450,999	+		Ga0059261_2344	0.43	-2.6
2,451,000	-		Ga0059261_2344	0.43	-0.3
2,451,000	-		Ga0059261_2344	0.43	-0.3
2,451,023	+		Ga0059261_2344	0.46	+0.5
2,451,023	+		Ga0059261_2344	0.46	+0.2
2,451,023	+		Ga0059261_2344	0.46	-0.3
2,451,023	+		Ga0059261_2344	0.46	-0.9
2,451,024	-		Ga0059261_2344	0.46	+0.6
2,451,024	-		Ga0059261_2344	0.46	-0.1
2,451,024	-		Ga0059261_2344	0.46	-0.9
2,451,150	+		Ga0059261_2344	0.64	-2.3
2,451,151	-		Ga0059261_2344	0.65	+0.4
2,451,293	+		Ga0059261_2344	0.85	-1.7
2,451,294	-		Ga0059261_2344	0.85	+0.2
2,451,294	-		Ga0059261_2344	0.85	+0.0
2,451,294	-		Ga0059261_2344	0.85	-0.4
2,451,304	+		Ga0059261_2344	0.87	-0.1
2,451,328	+				-0.3
2,451,328	+				-0.5
2,451,328	+				-0.3
2,451,328	+				-0.9
2,451,328	+				-1.2
2,451,328	+				+0.5
2,451,329	-				+0.4
2,451,329	-				-0.6
2,451,329	-				-0.0
2,451,329	-				-0.4
2,451,333	+				+1.1
2,451,333	+				+0.4
2,451,333	+				+0.6
2,451,333	+				-0.4
2,451,333	+				-0.7
2,451,334	-				-0.3
2,451,334	-				+0.7
2,451,334	-				-1.3
2,451,334	-				+0.5
2,451,334	-				-1.3
2,451,347	+				-0.9
2,451,347	+				-1.1
2,451,348	-				+0.4
2,451,348	-				+0.5
2,451,362	+				-0.9
2,451,362	+				+0.2
2,451,363	-				-0.0
2,451,415	+				-0.1
2,451,415	+				-0.0
2,451,415	+				+0.3
2,451,415	+				-0.3
2,451,415	+				-0.7
2,451,415	+				-0.7
2,451,415	+				-1.6
2,451,415	+				+0.8
2,451,415	+				-0.3
2,451,415	+				+0.2
2,451,415	+				+0.1
2,451,415	+				+1.9
2,451,529	-		Ga0059261_2345	0.21	-0.2
2,451,736	+		Ga0059261_2345	0.53	-0.5
2,451,736	+		Ga0059261_2345	0.53	-0.4
2,451,736	+		Ga0059261_2345	0.53	-1.0
2,451,736	+				+1.4
2,451,736	+		Ga0059261_2345	0.53	-1.0
2,451,736	+		Ga0059261_2345	0.53	+0.0
2,451,737	-		Ga0059261_2345	0.53	+0.1
2,451,737	-		Ga0059261_2345	0.53	-0.4
2,451,737	-		Ga0059261_2345	0.53	+0.0
2,451,737	-		Ga0059261_2345	0.53	+0.1
2,451,737	-		Ga0059261_2345	0.53	+0.2
2,451,737	-		Ga0059261_2345	0.53	-0.9
2,451,865	-		Ga0059261_2345	0.73	+0.1
2,451,865	-				+1.0
2,451,865	-		Ga0059261_2345	0.73	+0.6
2,451,922	+		Ga0059261_2345	0.82	+0.2
2,451,922	+		Ga0059261_2345	0.82	-1.0
2,451,966	+				+2.4
2,451,966	+		Ga0059261_2345	0.89	-1.2
2,451,966	+		Ga0059261_2345	0.89	+0.6
2,451,966	+		Ga0059261_2345	0.89	+1.6
2,451,967	-		Ga0059261_2345	0.89	+0.7
2,451,967	-		Ga0059261_2345	0.89	+0.5
2,451,967	-		Ga0059261_2345	0.89	-1.1
2,451,967	-		Ga0059261_2345	0.89	-0.2
2,451,967	-		Ga0059261_2345	0.89	+0.2
2,451,967	-		Ga0059261_2345	0.89	+0.1
2,452,027	+				+0.8
2,452,027	+				-0.7
2,452,028	-				+0.8
2,452,064	+				+0.7
2,452,064	+				-0.1
2,452,064	+				+0.8
2,452,095	-				-0.1
2,452,223	+		Ga0059261_2346	0.15	+0.4
2,452,223	+		Ga0059261_2346	0.15	-3.2
2,452,267	+		Ga0059261_2346	0.19	+1.5
2,452,282	-		Ga0059261_2346	0.20	-0.2
2,452,341	+		Ga0059261_2346	0.25	-0.5
2,452,396	-		Ga0059261_2346	0.29	+0.2
2,452,396	-		Ga0059261_2346	0.29	+0.4
2,452,396	-		Ga0059261_2346	0.29	+0.6