Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1233

Experiment: nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 5 mM
1,292,371	+		Ga0059261_1232	0.79	-0.1
1,292,371	+		Ga0059261_1232	0.79	+1.2
1,292,371	+		Ga0059261_1232	0.79	+0.7
1,292,371	+		Ga0059261_1232	0.79	-0.6
1,292,371	+		Ga0059261_1232	0.79	+0.1
1,292,371	+		Ga0059261_1232	0.79	+0.5
1,292,372	-		Ga0059261_1232	0.79	-0.2
1,292,372	-		Ga0059261_1232	0.79	-1.1
1,292,372	-		Ga0059261_1232	0.79	-0.8
1,292,372	-		Ga0059261_1232	0.79	+0.2
1,292,372	-		Ga0059261_1232	0.79	+0.3
1,292,372	-		Ga0059261_1232	0.79	+0.1
1,292,451	+		Ga0059261_1232	0.82	-0.3
1,292,451	+		Ga0059261_1232	0.82	-0.1
1,292,452	-		Ga0059261_1232	0.82	-0.3
1,292,452	-		Ga0059261_1232	0.82	-0.6
1,292,463	+		Ga0059261_1232	0.83	-0.7
1,292,463	+		Ga0059261_1232	0.83	+1.8
1,292,464	-		Ga0059261_1232	0.83	-0.3
1,292,464	-		Ga0059261_1232	0.83	+0.1
1,292,601	+		Ga0059261_1232	0.89	-1.1
1,292,601	+		Ga0059261_1232	0.89	-0.3
1,292,602	-		Ga0059261_1232	0.89	+0.7
1,292,602	-		Ga0059261_1232	0.89	-0.3
1,292,607	+		Ga0059261_1232	0.89	+0.2
1,292,607	+		Ga0059261_1232	0.89	+0.5
1,292,607	+		Ga0059261_1232	0.89	-0.0
1,292,607	+		Ga0059261_1232	0.89	+0.5
1,292,607	+		Ga0059261_1232	0.89	-0.9
1,292,607	+		Ga0059261_1232	0.89	-0.2
1,292,607	+		Ga0059261_1232	0.89	+0.7
1,292,607	+		Ga0059261_1232	0.89	-0.2
1,292,850	+				+0.2
1,292,868	+				+0.4
1,292,899	+				-0.6
1,292,899	+				+0.6
1,292,899	+				-0.5
1,292,945	+				+0.2
1,292,945	+				-0.2
1,292,945	+				-0.4
1,292,945	+				-0.5
1,292,945	+				-0.4
1,292,946	-				+0.6
1,292,946	-				+0.2
1,292,946	-				+2.1
1,292,946	-				-1.3
1,292,946	-				+0.1
1,292,946	-				-0.4
1,292,950	+				+0.1
1,292,950	+				-0.0
1,292,950	+				-0.2
1,292,950	+				+1.6
1,292,951	-				-0.2
1,292,951	-				+0.1
1,292,951	-				-0.4
1,292,951	-				+0.6
1,292,951	-				+0.5
1,292,951	-				-0.7
1,292,965	+				-0.3
1,292,965	+				-0.5
1,292,965	+				-1.5
1,292,966	-				+0.7
1,293,006	-				-0.8
1,293,031	+				+0.1
1,293,032	-				+0.1
1,293,112	+				-0.3
1,293,112	+				+0.5
1,293,113	-				+0.3
1,293,113	-				-0.6
1,293,113	-				-1.6
1,293,113	-				-0.2
1,293,113	-				-0.4
1,293,136	+				-0.0
1,293,137	-				+0.1
1,293,137	-				-0.2
1,293,137	-				+0.1
1,293,137	-				-0.7
1,293,148	+				+0.0
1,293,207	+				-0.4
1,293,207	+				-0.8
1,293,208	-				-0.5
1,293,214	+				-0.4
1,293,214	+				-0.4
1,293,215	-				-0.0
1,293,215	-				+0.7
1,293,218	+				+0.5
1,293,218	+				+0.0
1,293,219	-				-0.0
1,293,219	-				-0.1
1,293,278	+				+0.1
1,293,278	+				+0.7
1,293,279	-				+0.3
1,293,279	-				-0.1
1,293,330	+				+0.3
1,293,349	+				-0.8
1,293,369	+		Ga0059261_1233	0.10	+0.7
1,293,369	+		Ga0059261_1233	0.10	+0.8
1,293,370	-		Ga0059261_1233	0.10	-0.4
1,293,404	+		Ga0059261_1233	0.14	+0.9
1,293,437	+		Ga0059261_1233	0.18	-0.8
1,293,438	-				+1.1
1,293,438	-		Ga0059261_1233	0.18	+1.0
1,293,542	+		Ga0059261_1233	0.29	+0.2
1,293,542	+		Ga0059261_1233	0.29	-0.0
1,293,542	+		Ga0059261_1233	0.29	+0.2
1,293,575	+				-0.5
1,293,575	+		Ga0059261_1233	0.33	-0.1
1,293,575	+		Ga0059261_1233	0.33	-0.1
1,293,575	+		Ga0059261_1233	0.33	-0.3
1,293,575	+		Ga0059261_1233	0.33	-0.2
1,293,576	-		Ga0059261_1233	0.33	-0.3
1,293,576	-		Ga0059261_1233	0.33	-0.0
1,293,576	-		Ga0059261_1233	0.33	+0.8
1,293,576	-		Ga0059261_1233	0.33	+0.2
1,293,930	-		Ga0059261_1233	0.72	-0.2
1,293,930	-		Ga0059261_1233	0.72	+0.8
1,293,984	+		Ga0059261_1233	0.78	-0.4
1,293,984	+		Ga0059261_1233	0.78	+0.1
1,293,984	+		Ga0059261_1233	0.78	-0.6
1,293,985	-		Ga0059261_1233	0.78	+1.1
1,293,985	-		Ga0059261_1233	0.78	+0.5
1,293,985	-		Ga0059261_1233	0.78	-0.0
1,293,985	-		Ga0059261_1233	0.78	-0.3
1,294,089	+		Ga0059261_1233	0.89	+0.2
1,294,089	+		Ga0059261_1233	0.89	+0.3
1,294,089	+		Ga0059261_1233	0.89	-0.4
1,294,090	-		Ga0059261_1233	0.89	-0.5
1,294,090	-		Ga0059261_1233	0.89	+1.2
1,294,090	-		Ga0059261_1233	0.89	-0.4
1,294,090	-		Ga0059261_1233	0.89	+1.1
1,294,090	-		Ga0059261_1233	0.89	+1.1
1,294,315	+		Ga0059261_1234	0.50	-1.7
1,294,315	+		Ga0059261_1234	0.50	+0.0
1,294,315	+		Ga0059261_1234	0.50	+1.1
1,294,315	+		Ga0059261_1234	0.50	+0.1
1,294,315	+		Ga0059261_1234	0.50	-0.6
1,294,316	-		Ga0059261_1234	0.50	-0.1
1,294,316	-		Ga0059261_1234	0.50	+0.3
1,294,333	+		Ga0059261_1234	0.57	-1.4
1,294,333	+		Ga0059261_1234	0.57	-0.5
1,294,333	+		Ga0059261_1234	0.57	-1.8
1,294,333	+		Ga0059261_1234	0.57	+0.7
1,294,333	+		Ga0059261_1234	0.57	-0.2
1,294,333	+		Ga0059261_1234	0.57	+0.1
1,294,334	-		Ga0059261_1234	0.57	-0.0
1,294,479	+				-0.4
1,294,480	-				+2.1
1,294,516	-				+0.4
1,294,570	+				-0.1
1,294,571	-				-1.2
1,294,571	-				-0.5
1,294,571	-				+0.5
1,294,609	+				-0.9
1,294,609	+				+0.6
1,294,609	+				-0.7
1,294,609	+				-0.5
1,294,609	+				-0.9
1,294,609	+				+0.7
1,294,609	+				-1.4
1,294,609	+				-0.5
1,294,609	+				-0.2
1,294,609	+				+0.1
1,294,609	+				-0.2
1,294,610	-				-0.1
1,294,610	-				+0.1
1,294,610	-				+0.1
1,294,610	-				-0.4
1,294,610	-				-0.1
1,294,610	-				-0.8
1,294,610	-				-0.3
1,294,610	-				-0.4
1,294,610	-				-0.2
1,294,619	+				+0.7
1,294,619	+				+0.1
1,294,620	-				-1.1
1,294,620	-				+0.5
1,294,648	+				+0.9
1,294,648	+				-0.6
1,294,648	+				+0.3
1,294,649	-				-0.2
1,294,748	+				+0.6
1,294,748	+				-0.4
1,294,749	-				-0.0
1,294,749	-				+0.9
1,294,850	+				-0.2
1,294,889	-				+0.5
1,294,913	+				+0.0
1,294,923	+				+0.5
1,294,923	+				+0.1
1,294,923	+				-0.3
1,294,923	+				-0.2
1,294,923	+				-0.0
1,294,923	+				+0.4
1,294,924	-				+1.3
1,294,924	-				-0.2
1,294,924	-				+0.7
1,294,924	-				+1.5
1,294,924	-				-0.6
1,294,924	-				+0.3
1,294,924	-				+0.3
1,294,924	-				+0.5
1,294,947	+				-0.0
1,294,947	+				-2.0
1,294,947	+				+2.1
1,294,947	+				-0.1
1,294,948	-				+0.7
1,294,948	-				+0.1
1,294,959	+				-0.5
1,294,959	+				+0.8
1,294,960	-				+2.1