Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03101

Experiment: PYE with Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Cisplatin 0.005 mg/ml
3,250,454	-		CCNA_03099	0.15	-1.3
3,250,454	-		CCNA_03099	0.15	-0.6
3,250,454	-		CCNA_03099	0.15	-2.5
3,250,455	-		CCNA_03099	0.15	-0.0
3,250,456	+		CCNA_03099	0.15	+0.3
3,250,456	+		CCNA_03099	0.15	+0.2
3,250,456	+		CCNA_03099	0.15	+1.1
3,250,456	+		CCNA_03099	0.15	+1.2
3,250,464	-		CCNA_03099	0.16	+0.7
3,250,494	+		CCNA_03099	0.20	+1.0
3,250,494	+		CCNA_03099	0.20	-0.9
3,250,496	-		CCNA_03099	0.21	-0.8
3,250,502	-				+1.7
3,250,502	-		CCNA_03099	0.21	+1.2
3,250,502	-		CCNA_03099	0.21	-1.9
3,250,646	+		CCNA_03099	0.41	+2.0
3,250,654	+		CCNA_03099	0.42	-1.1
3,250,662	-		CCNA_03099	0.43	-1.6
3,250,664	+		CCNA_03099	0.43	-1.8
3,250,664	+		CCNA_03099	0.43	-0.3
3,250,664	+		CCNA_03099	0.43	-1.2
3,250,672	-		CCNA_03099	0.44	-1.6
3,250,672	-		CCNA_03099	0.44	-2.3
3,250,672	-		CCNA_03099	0.44	-0.8
3,250,672	-		CCNA_03099	0.44	+1.2
3,250,699	-		CCNA_03099	0.48	+2.2
3,250,704	+		CCNA_03099	0.49	-2.3
3,250,712	-		CCNA_03099	0.50	+0.7
3,250,732	-		CCNA_03099	0.52	+1.2
3,250,745	+		CCNA_03099	0.54	+1.7
3,250,752	+		CCNA_03099	0.55	-0.8
3,250,753	-		CCNA_03099	0.55	+0.5
3,250,758	+		CCNA_03099	0.56	-1.3
3,250,764	+		CCNA_03099	0.57	-0.3
3,250,779	+		CCNA_03099	0.59	+0.5
3,250,796	-		CCNA_03099	0.61	-0.8
3,250,798	+		CCNA_03099	0.61	+1.2
3,250,841	+		CCNA_03099	0.67	+0.2
3,250,849	-		CCNA_03099	0.68	-1.9
3,250,885	-		CCNA_03099	0.73	+0.8
3,250,901	-		CCNA_03099	0.75	-1.6
3,250,982	-		CCNA_03099	0.86	+0.0
3,251,003	-		CCNA_03099	0.89	-1.1
3,251,070	+				+0.9
3,251,107	+				-3.2
3,251,121	+				-0.7
3,251,121	+				-1.8
3,251,121	+				+1.2
3,251,121	+				+1.2
3,251,132	+				+0.1
3,251,135	-				-0.0
3,251,135	-				+0.3
3,251,163	+		CCNA_03100	0.13	-0.1
3,251,163	+		CCNA_03100	0.13	-0.2
3,251,170	+		CCNA_03100	0.16	+1.2
3,251,171	-		CCNA_03100	0.17	+0.2
3,251,171	-		CCNA_03100	0.17	+0.8
3,251,179	-		CCNA_03100	0.20	+0.2
3,251,202	+		CCNA_03100	0.31	-3.0
3,251,215	+		CCNA_03100	0.36	-0.6
3,251,228	+		CCNA_03100	0.42	+1.7
3,251,228	+		CCNA_03100	0.42	+0.1
3,251,236	-		CCNA_03100	0.46	+2.0
3,251,248	+		CCNA_03100	0.51	-0.3
3,251,256	-		CCNA_03100	0.55	-0.0
3,251,261	-		CCNA_03100	0.57	-0.3
3,251,270	+		CCNA_03100	0.61	-0.3
3,251,271	-		CCNA_03100	0.62	-1.1
3,251,276	+		CCNA_03100	0.64	+0.8
3,251,276	+		CCNA_03100	0.64	+1.3
3,251,276	+		CCNA_03100	0.64	+0.8
3,251,276	+		CCNA_03100	0.64	+1.0
3,251,284	-		CCNA_03100	0.68	+0.5
3,251,285	+		CCNA_03100	0.68	-1.1
3,251,293	-		CCNA_03100	0.72	+0.2
3,251,314	+		CCNA_03100	0.81	-0.0
3,251,363	-				-0.2
3,251,450	+				-0.2
3,251,450	+				-0.3
3,251,450	+				-0.1
3,251,458	-				-1.6
3,251,458	-				-1.2
3,251,486	-				-1.9
3,251,488	+				-0.3
3,251,488	+				-3.3
3,251,491	-				-2.6
3,251,528	+				-2.9
3,251,531	-				-1.8
3,251,536	-				-1.9
3,251,572	-		CCNA_03101	0.13	-2.5
3,251,582	-		CCNA_03101	0.14	-0.3
3,251,589	-		CCNA_03101	0.15	-1.8
3,251,671	-		CCNA_03101	0.24	-2.6
3,251,692	-		CCNA_03101	0.26	-1.3
3,251,722	-		CCNA_03101	0.29	-0.3
3,251,722	-		CCNA_03101	0.29	-3.0
3,251,740	+		CCNA_03101	0.31	-2.2
3,251,740	+		CCNA_03101	0.31	-1.8
3,251,748	-		CCNA_03101	0.32	-0.3
3,251,804	-		CCNA_03101	0.38	+2.2
3,251,830	-		CCNA_03101	0.41	-1.6
3,251,867	+		CCNA_03101	0.45	-3.2
3,251,907	-		CCNA_03101	0.49	-1.1
3,251,929	+		CCNA_03101	0.52	-1.9
3,251,929	-		CCNA_03101	0.52	-3.8
3,251,937	+		CCNA_03101	0.53	-0.8
3,251,942	+		CCNA_03101	0.53	-0.3
3,251,945	-		CCNA_03101	0.54	-2.6
3,251,945	-		CCNA_03101	0.54	-2.3
3,251,960	+		CCNA_03101	0.55	+1.2
3,251,960	+		CCNA_03101	0.55	-1.8
3,251,960	+		CCNA_03101	0.55	-1.3
3,251,960	+		CCNA_03101	0.55	-0.8
3,251,968	-		CCNA_03101	0.56	-2.1
3,251,968	-		CCNA_03101	0.56	-1.6
3,251,984	+		CCNA_03101	0.58	-1.1
3,251,987	-		CCNA_03101	0.58	-2.5
3,251,987	-				+0.2
3,251,992	-		CCNA_03101	0.59	-1.3
3,252,029	+		CCNA_03101	0.63	-2.6
3,252,029	+		CCNA_03101	0.63	-1.3
3,252,044	-		CCNA_03101	0.64	-2.6
3,252,112	+		CCNA_03101	0.72	-3.3
3,252,112	+		CCNA_03101	0.72	+1.2
3,252,149	-		CCNA_03101	0.76	-2.8
3,252,227	+		CCNA_03101	0.84	-1.6
3,252,230	-		CCNA_03101	0.85	-2.5
3,252,232	+		CCNA_03101	0.85	-1.6
3,252,232	+		CCNA_03101	0.85	+1.2
3,252,269	+		CCNA_03101	0.89	-0.8
3,252,281	+				-2.7
3,252,291	+				-1.9
3,252,298	-				-2.1
3,252,361	-				-1.2
3,252,374	+				-1.0
3,252,387	-				-3.0
3,252,387	-				-1.2
3,252,432	-				-0.6
3,252,442	-				+0.6
3,252,463	-				+0.6
3,252,482	-				-1.0
3,252,482	-				+0.7
3,252,503	+				-0.5
3,252,533	+		CCNA_03102	0.11	-1.3
3,252,611	+		CCNA_03102	0.16	+0.7
3,252,611	+		CCNA_03102	0.16	-0.3
3,252,619	-		CCNA_03102	0.17	-0.7
3,252,619	-		CCNA_03102	0.17	+1.1
3,252,619	-		CCNA_03102	0.17	-0.9
3,252,619	-		CCNA_03102	0.17	+0.6
3,252,619	-		CCNA_03102	0.17	+0.5
3,252,619	-		CCNA_03102	0.17	-1.3
3,252,717	+		CCNA_03102	0.24	-1.8
3,252,725	-		CCNA_03102	0.24	-0.6
3,252,725	-		CCNA_03102	0.24	-0.3
3,252,727	+		CCNA_03102	0.24	-1.7
3,252,774	-		CCNA_03102	0.27	+0.2
3,252,783	-		CCNA_03102	0.28	-1.7
3,252,784	+		CCNA_03102	0.28	+0.2
3,252,792	-		CCNA_03102	0.29	+0.3
3,252,792	-		CCNA_03102	0.29	-0.2
3,252,792	-		CCNA_03102	0.29	-0.2
3,252,817	+		CCNA_03102	0.30	+0.7
3,252,817	+		CCNA_03102	0.30	+1.2
3,252,825	-		CCNA_03102	0.31	+0.9
3,252,825	-		CCNA_03102	0.31	-0.6
3,252,825	-		CCNA_03102	0.31	-0.4
3,252,842	+		CCNA_03102	0.32	+0.6
3,252,851	-		CCNA_03102	0.33	+0.9
3,252,861	-		CCNA_03102	0.33	+0.9
3,252,899	-		CCNA_03102	0.36	-1.5
3,252,944	+		CCNA_03102	0.39	-0.8
3,252,944	+		CCNA_03102	0.39	-0.0
3,252,949	+		CCNA_03102	0.39	-0.3
3,252,949	+		CCNA_03102	0.39	-0.5
3,252,952	-		CCNA_03102	0.39	+0.6
3,252,957	-		CCNA_03102	0.40	-0.9
3,252,980	+		CCNA_03102	0.41	+1.2
3,252,980	+		CCNA_03102	0.41	-1.8
3,252,980	+		CCNA_03102	0.41	-0.3
3,252,988	-		CCNA_03102	0.42	-0.2
3,253,000	+		CCNA_03102	0.43	+0.2
3,253,000	+		CCNA_03102	0.43	+0.1
3,253,008	-		CCNA_03102	0.43	+0.3
3,253,024	+		CCNA_03102	0.44	-1.3
3,253,105	+		CCNA_03102	0.50	-0.8
3,253,108	-		CCNA_03102	0.50	+0.7
3,253,113	-		CCNA_03102	0.50	+1.0
3,253,142	-		CCNA_03102	0.52	+1.0
3,253,144	+		CCNA_03102	0.52	-1.1
3,253,168	-		CCNA_03102	0.54	+1.1
3,253,187	-		CCNA_03102	0.55	-0.0
3,253,189	-		CCNA_03102	0.55	+1.1
3,253,196	+		CCNA_03102	0.56	-0.7
3,253,214	+		CCNA_03102	0.57	-0.9
3,253,225	+		CCNA_03102	0.58	+0.1
3,253,246	-		CCNA_03102	0.59	-0.8
3,253,260	+		CCNA_03102	0.60	-0.3
3,253,260	+		CCNA_03102	0.60	+0.9
3,253,275	-		CCNA_03102	0.61	-0.0
3,253,320	+				+1.2
3,253,370	+		CCNA_03102	0.68	-0.1