Experiment: Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31065 and AZOBR_RS31070 overlap by 4 nucleotides AZOBR_RS31070 and AZOBR_RS31075 are separated by 73 nucleotides AZOBR_RS31075 and AZOBR_RS31080 are separated by 133 nucleotides AZOBR_RS31080 and AZOBR_RS31085 are separated by 57 nucleotides
AZOBR_RS31065: AZOBR_RS31065 - hypothetical protein, at 335,990 to 336,550
_RS31065
AZOBR_RS31070: AZOBR_RS31070 - hypothetical protein, at 336,547 to 337,155
_RS31070
AZOBR_RS31075: AZOBR_RS31075 - UTP--glucose-1-phosphate uridylyltransferase, at 337,229 to 338,098
_RS31075
AZOBR_RS31080: AZOBR_RS31080 - hypothetical protein, at 338,232 to 338,948
_RS31080
AZOBR_RS31085: AZOBR_RS31085 - hypothetical protein, at 339,006 to 339,752
_RS31085
Position (kb) 337
338
339 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 336.398 kb on + strand, within AZOBR_RS31065 at 336.399 kb on - strand, within AZOBR_RS31065 at 336.565 kb on + strand at 336.565 kb on + strand at 336.566 kb on - strand at 336.710 kb on - strand, within AZOBR_RS31070 at 336.710 kb on - strand, within AZOBR_RS31070 at 336.827 kb on - strand, within AZOBR_RS31070 at 337.237 kb on - strand at 338.281 kb on + strand at 338.282 kb on - strand at 338.282 kb on - strand at 338.340 kb on + strand, within AZOBR_RS31080 at 338.341 kb on - strand, within AZOBR_RS31080 at 338.378 kb on + strand, within AZOBR_RS31080 at 338.383 kb on + strand, within AZOBR_RS31080 at 338.383 kb on + strand, within AZOBR_RS31080 at 338.384 kb on - strand, within AZOBR_RS31080 at 338.403 kb on - strand, within AZOBR_RS31080 at 338.403 kb on - strand, within AZOBR_RS31080 at 338.674 kb on + strand, within AZOBR_RS31080 at 338.674 kb on + strand, within AZOBR_RS31080 at 338.675 kb on - strand, within AZOBR_RS31080 at 338.991 kb on + strand at 338.992 kb on - strand at 339.007 kb on + strand at 339.008 kb on - strand at 339.008 kb on - strand at 339.097 kb on + strand, within AZOBR_RS31085 at 339.097 kb on + strand, within AZOBR_RS31085 at 339.098 kb on - strand, within AZOBR_RS31085 at 339.098 kb on - strand, within AZOBR_RS31085 at 339.098 kb on - strand, within AZOBR_RS31085
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.3 mM remove 336,398 + AZOBR_RS31065 0.73 -2.6 336,399 - AZOBR_RS31065 0.73 -1.5 336,565 + -0.2 336,565 + -1.1 336,566 - -0.0 336,710 - AZOBR_RS31070 0.27 +0.4 336,710 - AZOBR_RS31070 0.27 +0.4 336,827 - AZOBR_RS31070 0.46 +0.5 337,237 - +0.2 338,281 + +0.6 338,282 - +1.1 338,282 - -0.4 338,340 + AZOBR_RS31080 0.15 -0.8 338,341 - AZOBR_RS31080 0.15 +0.9 338,378 + AZOBR_RS31080 0.20 -0.4 338,383 + AZOBR_RS31080 0.21 -0.3 338,383 + AZOBR_RS31080 0.21 -2.0 338,384 - AZOBR_RS31080 0.21 -0.5 338,403 - AZOBR_RS31080 0.24 -0.0 338,403 - AZOBR_RS31080 0.24 -1.6 338,674 + AZOBR_RS31080 0.62 -0.5 338,674 + AZOBR_RS31080 0.62 -0.1 338,675 - AZOBR_RS31080 0.62 +0.1 338,991 + -0.1 338,992 - +0.0 339,007 + -0.3 339,008 - +0.2 339,008 - -3.0 339,097 + AZOBR_RS31085 0.12 -1.2 339,097 + AZOBR_RS31085 0.12 -0.5 339,098 - AZOBR_RS31085 0.12 -0.6 339,098 - AZOBR_RS31085 0.12 -0.4 339,098 - AZOBR_RS31085 0.12 +0.4
Or see this region's nucleotide sequence