Experiment: Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS17095 and AZOBR_RS17100 overlap by 12 nucleotides AZOBR_RS17100 and AZOBR_RS17105 are separated by 158 nucleotides AZOBR_RS17105 and AZOBR_RS17110 are separated by 182 nucleotides AZOBR_RS17110 and AZOBR_RS17115 overlap by 4 nucleotides
AZOBR_RS17095: AZOBR_RS17095 - exported protein of unknown function, at 592,056 to 592,475
_RS17095
AZOBR_RS17100: AZOBR_RS17100 - AraC family transcriptional regulator, at 592,464 to 593,231
_RS17100
AZOBR_RS17105: AZOBR_RS17105 - Fosmidomycin resistance protein, at 593,390 to 594,595
_RS17105
AZOBR_RS17110: AZOBR_RS17110 - flavodoxin, at 594,778 to 595,260
_RS17110
AZOBR_RS17115: AZOBR_RS17115 - hypothetical protein, at 595,257 to 595,586
_RS17115
Position (kb) 593
594
595 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 592.492 kb on + strand at 592.492 kb on + strand at 592.492 kb on + strand at 592.492 kb on + strand at 592.492 kb on + strand at 592.492 kb on + strand at 592.492 kb on + strand at 592.493 kb on - strand at 592.493 kb on - strand at 592.556 kb on - strand, within AZOBR_RS17100 at 592.991 kb on - strand, within AZOBR_RS17100 at 593.307 kb on + strand at 593.307 kb on + strand at 593.308 kb on - strand at 593.308 kb on - strand at 593.308 kb on - strand at 593.308 kb on - strand at 593.308 kb on - strand at 593.308 kb on - strand at 593.507 kb on + strand at 593.570 kb on + strand, within AZOBR_RS17105 at 593.571 kb on - strand, within AZOBR_RS17105 at 593.571 kb on - strand, within AZOBR_RS17105 at 593.571 kb on - strand, within AZOBR_RS17105 at 593.702 kb on + strand, within AZOBR_RS17105 at 593.873 kb on + strand, within AZOBR_RS17105 at 593.873 kb on + strand, within AZOBR_RS17105 at 593.873 kb on + strand, within AZOBR_RS17105 at 593.874 kb on - strand, within AZOBR_RS17105 at 593.874 kb on - strand, within AZOBR_RS17105 at 593.967 kb on - strand, within AZOBR_RS17105 at 594.086 kb on + strand, within AZOBR_RS17105 at 594.086 kb on + strand, within AZOBR_RS17105 at 594.086 kb on + strand, within AZOBR_RS17105 at 594.086 kb on + strand, within AZOBR_RS17105 at 594.087 kb on - strand, within AZOBR_RS17105 at 594.113 kb on + strand, within AZOBR_RS17105 at 594.113 kb on + strand, within AZOBR_RS17105 at 594.113 kb on + strand, within AZOBR_RS17105 at 594.114 kb on - strand, within AZOBR_RS17105 at 594.116 kb on + strand, within AZOBR_RS17105 at 594.116 kb on + strand, within AZOBR_RS17105 at 594.117 kb on - strand, within AZOBR_RS17105 at 594.117 kb on - strand, within AZOBR_RS17105 at 594.117 kb on - strand, within AZOBR_RS17105 at 594.383 kb on + strand, within AZOBR_RS17105 at 594.384 kb on - strand, within AZOBR_RS17105 at 594.796 kb on + strand at 594.796 kb on + strand at 594.796 kb on + strand at 594.796 kb on + strand at 594.796 kb on + strand at 594.796 kb on + strand at 594.797 kb on - strand at 594.935 kb on - strand, within AZOBR_RS17110 at 595.082 kb on - strand, within AZOBR_RS17110 at 595.082 kb on - strand, within AZOBR_RS17110 at 595.139 kb on - strand, within AZOBR_RS17110 at 595.139 kb on - strand, within AZOBR_RS17110 at 595.312 kb on - strand, within AZOBR_RS17115 at 595.410 kb on + strand, within AZOBR_RS17115 at 595.555 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.3 mM remove 592,492 + +3.7 592,492 + +0.3 592,492 + +0.5 592,492 + +1.0 592,492 + -0.6 592,492 + -0.1 592,492 + -0.3 592,493 - +0.9 592,493 - -0.5 592,556 - AZOBR_RS17100 0.12 +0.2 592,991 - AZOBR_RS17100 0.69 -0.3 593,307 + -3.4 593,307 + -1.0 593,308 - -0.2 593,308 - +1.1 593,308 - +0.1 593,308 - -0.9 593,308 - +0.3 593,308 - -1.1 593,507 + -0.3 593,570 + AZOBR_RS17105 0.15 +0.2 593,571 - AZOBR_RS17105 0.15 -0.1 593,571 - AZOBR_RS17105 0.15 +1.7 593,571 - AZOBR_RS17105 0.15 -0.7 593,702 + AZOBR_RS17105 0.26 +1.2 593,873 + AZOBR_RS17105 0.40 +0.3 593,873 + AZOBR_RS17105 0.40 +0.9 593,873 + AZOBR_RS17105 0.40 +1.4 593,874 - AZOBR_RS17105 0.40 -0.6 593,874 - AZOBR_RS17105 0.40 +0.3 593,967 - AZOBR_RS17105 0.48 +0.4 594,086 + AZOBR_RS17105 0.58 +0.1 594,086 + AZOBR_RS17105 0.58 +0.6 594,086 + AZOBR_RS17105 0.58 -0.1 594,086 + AZOBR_RS17105 0.58 -0.4 594,087 - AZOBR_RS17105 0.58 -1.7 594,113 + AZOBR_RS17105 0.60 +5.6 594,113 + AZOBR_RS17105 0.60 -0.0 594,113 + AZOBR_RS17105 0.60 +1.3 594,114 - AZOBR_RS17105 0.60 -1.3 594,116 + AZOBR_RS17105 0.60 -3.5 594,116 + AZOBR_RS17105 0.60 -1.0 594,117 - AZOBR_RS17105 0.60 +1.5 594,117 - AZOBR_RS17105 0.60 -0.1 594,117 - AZOBR_RS17105 0.60 +0.1 594,383 + AZOBR_RS17105 0.82 +0.7 594,384 - AZOBR_RS17105 0.82 +0.6 594,796 + +0.5 594,796 + +0.7 594,796 + -1.5 594,796 + -0.3 594,796 + +3.3 594,796 + +0.2 594,797 - -1.6 594,935 - AZOBR_RS17110 0.33 +1.3 595,082 - AZOBR_RS17110 0.63 -0.1 595,082 - AZOBR_RS17110 0.63 -0.5 595,139 - AZOBR_RS17110 0.75 -0.5 595,139 - AZOBR_RS17110 0.75 +0.9 595,312 - AZOBR_RS17115 0.17 -1.1 595,410 + AZOBR_RS17115 0.46 +0.8 595,555 - +0.3
Or see this region's nucleotide sequence