Experiment: Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS04790 and AZOBR_RS04795 are separated by 54 nucleotides AZOBR_RS04795 and AZOBR_RS04800 are separated by 41 nucleotides
AZOBR_RS04790: AZOBR_RS04790 - acetoin catabolism protein X, at 1,007,281 to 1,008,339
_RS04790
AZOBR_RS04795: AZOBR_RS04795 - acetoin:2 6-dichlorophenolindophenol oxidoreductase subunit alpha, at 1,008,394 to 1,009,377
_RS04795
AZOBR_RS04800: AZOBR_RS04800 - pyruvate dehydrogenase subunit beta, at 1,009,419 to 1,010,450
_RS04800
Position (kb)
1008
1009
1010 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1007.875 kb on + strand, within AZOBR_RS04790 at 1007.875 kb on + strand, within AZOBR_RS04790 at 1008.292 kb on + strand at 1008.293 kb on - strand at 1008.352 kb on + strand at 1008.409 kb on + strand at 1008.443 kb on - strand at 1008.529 kb on + strand, within AZOBR_RS04795 at 1008.529 kb on + strand, within AZOBR_RS04795 at 1008.664 kb on + strand, within AZOBR_RS04795 at 1008.664 kb on + strand, within AZOBR_RS04795 at 1008.664 kb on + strand, within AZOBR_RS04795 at 1008.870 kb on - strand, within AZOBR_RS04795 at 1008.979 kb on + strand, within AZOBR_RS04795 at 1008.980 kb on - strand, within AZOBR_RS04795 at 1008.980 kb on - strand, within AZOBR_RS04795 at 1008.980 kb on - strand, within AZOBR_RS04795 at 1009.130 kb on - strand, within AZOBR_RS04795 at 1009.130 kb on - strand, within AZOBR_RS04795 at 1009.363 kb on + strand at 1009.364 kb on - strand at 1009.364 kb on - strand at 1009.364 kb on - strand at 1009.364 kb on - strand at 1009.364 kb on - strand at 1009.636 kb on - strand, within AZOBR_RS04800 at 1009.755 kb on + strand, within AZOBR_RS04800 at 1009.755 kb on + strand, within AZOBR_RS04800 at 1009.756 kb on - strand, within AZOBR_RS04800 at 1009.756 kb on - strand, within AZOBR_RS04800 at 1009.902 kb on + strand, within AZOBR_RS04800 at 1009.902 kb on + strand, within AZOBR_RS04800 at 1010.010 kb on + strand, within AZOBR_RS04800 at 1010.010 kb on + strand, within AZOBR_RS04800 at 1010.011 kb on - strand, within AZOBR_RS04800 at 1010.011 kb on - strand, within AZOBR_RS04800 at 1010.011 kb on - strand, within AZOBR_RS04800 at 1010.370 kb on + strand at 1010.370 kb on + strand at 1010.370 kb on + strand at 1010.370 kb on + strand at 1010.371 kb on - strand at 1010.371 kb on - strand at 1010.371 kb on - strand at 1010.371 kb on - strand at 1010.371 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.3 mM remove 1,007,875 + AZOBR_RS04790 0.56 -0.8 1,007,875 + AZOBR_RS04790 0.56 +0.2 1,008,292 + +0.3 1,008,293 - +0.7 1,008,352 + +0.4 1,008,409 + -1.3 1,008,443 - -1.7 1,008,529 + AZOBR_RS04795 0.14 -1.8 1,008,529 + AZOBR_RS04795 0.14 +0.2 1,008,664 + AZOBR_RS04795 0.27 +0.0 1,008,664 + AZOBR_RS04795 0.27 -0.7 1,008,664 + AZOBR_RS04795 0.27 +0.0 1,008,870 - AZOBR_RS04795 0.48 -1.3 1,008,979 + AZOBR_RS04795 0.59 -0.9 1,008,980 - AZOBR_RS04795 0.60 +0.4 1,008,980 - AZOBR_RS04795 0.60 +1.1 1,008,980 - AZOBR_RS04795 0.60 -0.2 1,009,130 - AZOBR_RS04795 0.75 +0.1 1,009,130 - AZOBR_RS04795 0.75 +1.7 1,009,363 + -1.7 1,009,364 - -1.0 1,009,364 - -0.3 1,009,364 - +0.3 1,009,364 - -2.8 1,009,364 - +0.1 1,009,636 - AZOBR_RS04800 0.21 +0.1 1,009,755 + AZOBR_RS04800 0.33 +0.2 1,009,755 + AZOBR_RS04800 0.33 +0.2 1,009,756 - AZOBR_RS04800 0.33 +0.3 1,009,756 - AZOBR_RS04800 0.33 -0.4 1,009,902 + AZOBR_RS04800 0.47 +0.3 1,009,902 + AZOBR_RS04800 0.47 +0.1 1,010,010 + AZOBR_RS04800 0.57 +0.2 1,010,010 + AZOBR_RS04800 0.57 -0.1 1,010,011 - AZOBR_RS04800 0.57 +1.4 1,010,011 - AZOBR_RS04800 0.57 +0.6 1,010,011 - AZOBR_RS04800 0.57 +0.1 1,010,370 + -0.4 1,010,370 + +0.0 1,010,370 + +0.4 1,010,370 + -1.0 1,010,371 - +1.2 1,010,371 - +0.7 1,010,371 - +0.1 1,010,371 - -0.6 1,010,371 - +0.2
Or see this region's nucleotide sequence