Experiment: Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03820 and AZOBR_RS03825 are separated by 29 nucleotides
AZOBR_RS03820: AZOBR_RS03820 - microcin C ABC transporter permease YejB, at 805,221 to 806,330
_RS03820
AZOBR_RS03825: AZOBR_RS03825 - hypothetical protein, at 806,360 to 808,246
_RS03825
Position (kb) 805
806
807 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 804.487 kb on + strand at 804.775 kb on + strand at 804.775 kb on + strand at 804.775 kb on + strand at 804.776 kb on - strand at 804.870 kb on - strand at 804.944 kb on + strand at 804.945 kb on - strand at 805.038 kb on - strand at 805.038 kb on - strand at 805.267 kb on + strand at 805.268 kb on - strand at 805.319 kb on - strand at 805.319 kb on - strand at 805.319 kb on - strand at 805.343 kb on - strand, within AZOBR_RS03820 at 805.546 kb on + strand, within AZOBR_RS03820 at 805.546 kb on + strand, within AZOBR_RS03820 at 805.546 kb on + strand, within AZOBR_RS03820 at 805.547 kb on - strand, within AZOBR_RS03820 at 805.547 kb on - strand, within AZOBR_RS03820 at 805.547 kb on - strand, within AZOBR_RS03820 at 805.547 kb on - strand, within AZOBR_RS03820 at 805.547 kb on - strand, within AZOBR_RS03820 at 805.651 kb on + strand, within AZOBR_RS03820 at 805.651 kb on + strand, within AZOBR_RS03820 at 805.651 kb on + strand, within AZOBR_RS03820 at 805.651 kb on + strand, within AZOBR_RS03820 at 805.652 kb on - strand, within AZOBR_RS03820 at 805.880 kb on - strand, within AZOBR_RS03820 at 805.967 kb on - strand, within AZOBR_RS03820 at 805.994 kb on - strand, within AZOBR_RS03820 at 805.994 kb on - strand, within AZOBR_RS03820 at 806.320 kb on + strand at 806.320 kb on + strand at 806.321 kb on - strand at 806.321 kb on - strand at 806.321 kb on - strand at 806.321 kb on - strand at 806.445 kb on + strand at 806.485 kb on - strand at 806.526 kb on + strand at 806.526 kb on + strand at 806.527 kb on - strand at 806.527 kb on - strand at 807.156 kb on + strand, within AZOBR_RS03825 at 807.156 kb on + strand, within AZOBR_RS03825 at 807.157 kb on - strand, within AZOBR_RS03825 at 807.195 kb on + strand, within AZOBR_RS03825
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.3 mM remove 804,487 + +0.1 804,775 + +0.7 804,775 + -0.4 804,775 + +1.1 804,776 - +1.4 804,870 - +0.1 804,944 + +0.5 804,945 - +0.2 805,038 - +1.3 805,038 - +0.7 805,267 + +1.3 805,268 - +1.1 805,319 - -1.7 805,319 - -3.5 805,319 - -0.2 805,343 - AZOBR_RS03820 0.11 +1.4 805,546 + AZOBR_RS03820 0.29 +0.3 805,546 + AZOBR_RS03820 0.29 +0.3 805,546 + AZOBR_RS03820 0.29 +0.4 805,547 - AZOBR_RS03820 0.29 +1.3 805,547 - AZOBR_RS03820 0.29 +0.7 805,547 - AZOBR_RS03820 0.29 +0.9 805,547 - AZOBR_RS03820 0.29 +1.0 805,547 - AZOBR_RS03820 0.29 +0.7 805,651 + AZOBR_RS03820 0.39 -0.2 805,651 + AZOBR_RS03820 0.39 +4.9 805,651 + AZOBR_RS03820 0.39 +0.2 805,651 + AZOBR_RS03820 0.39 +1.5 805,652 - AZOBR_RS03820 0.39 +0.6 805,880 - AZOBR_RS03820 0.59 -0.4 805,967 - AZOBR_RS03820 0.67 -1.7 805,994 - AZOBR_RS03820 0.70 -0.1 805,994 - AZOBR_RS03820 0.70 +1.9 806,320 + +1.4 806,320 + +0.8 806,321 - +0.6 806,321 - +0.9 806,321 - +0.2 806,321 - -0.7 806,445 + +0.0 806,485 - +1.0 806,526 + +0.0 806,526 + +0.1 806,527 - +3.0 806,527 - +1.9 807,156 + AZOBR_RS03825 0.42 -0.2 807,156 + AZOBR_RS03825 0.42 +0.3 807,157 - AZOBR_RS03825 0.42 -1.8 807,195 + AZOBR_RS03825 0.44 -0.2
Or see this region's nucleotide sequence