Experiment: Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02320 and AZOBR_RS02325 are separated by 88 nucleotides AZOBR_RS02325 and AZOBR_RS02335 are separated by 985 nucleotides
AZOBR_RS02320: AZOBR_RS02320 - amidase, at 479,215 to 479,961
_RS02320
AZOBR_RS02325: AZOBR_RS02325 - ABC transporter substrate-binding protein, at 480,050 to 481,561
_RS02325
AZOBR_RS02335: AZOBR_RS02335 - peptide ABC transporter permease, at 482,547 to 483,407
_RS02335
Position (kb) 480
481
482 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 479.083 kb on - strand at 479.254 kb on + strand at 479.254 kb on + strand at 479.255 kb on - strand at 479.488 kb on + strand, within AZOBR_RS02320 at 479.488 kb on + strand, within AZOBR_RS02320 at 479.488 kb on + strand, within AZOBR_RS02320 at 479.488 kb on + strand, within AZOBR_RS02320 at 479.489 kb on - strand, within AZOBR_RS02320 at 479.489 kb on - strand, within AZOBR_RS02320 at 479.489 kb on - strand, within AZOBR_RS02320 at 479.578 kb on + strand, within AZOBR_RS02320 at 479.579 kb on - strand, within AZOBR_RS02320 at 479.587 kb on + strand, within AZOBR_RS02320 at 479.746 kb on + strand, within AZOBR_RS02320 at 479.746 kb on + strand, within AZOBR_RS02320 at 479.746 kb on + strand, within AZOBR_RS02320 at 479.747 kb on - strand, within AZOBR_RS02320 at 479.747 kb on - strand, within AZOBR_RS02320 at 479.747 kb on - strand, within AZOBR_RS02320 at 479.812 kb on + strand, within AZOBR_RS02320 at 479.813 kb on - strand, within AZOBR_RS02320 at 479.935 kb on + strand at 479.936 kb on - strand at 480.242 kb on + strand, within AZOBR_RS02325 at 480.242 kb on + strand, within AZOBR_RS02325 at 480.242 kb on + strand, within AZOBR_RS02325 at 480.242 kb on + strand, within AZOBR_RS02325 at 480.243 kb on - strand, within AZOBR_RS02325 at 480.243 kb on - strand, within AZOBR_RS02325 at 480.254 kb on + strand, within AZOBR_RS02325 at 480.254 kb on + strand, within AZOBR_RS02325 at 480.341 kb on + strand, within AZOBR_RS02325 at 480.341 kb on + strand, within AZOBR_RS02325 at 480.341 kb on + strand, within AZOBR_RS02325 at 480.342 kb on - strand, within AZOBR_RS02325 at 480.461 kb on + strand, within AZOBR_RS02325 at 480.462 kb on - strand, within AZOBR_RS02325 at 480.462 kb on - strand, within AZOBR_RS02325 at 480.686 kb on + strand, within AZOBR_RS02325 at 480.686 kb on + strand, within AZOBR_RS02325 at 480.686 kb on + strand, within AZOBR_RS02325 at 480.803 kb on + strand, within AZOBR_RS02325 at 480.804 kb on - strand, within AZOBR_RS02325 at 480.804 kb on - strand, within AZOBR_RS02325 at 481.028 kb on + strand, within AZOBR_RS02325 at 481.028 kb on + strand, within AZOBR_RS02325 at 481.050 kb on - strand, within AZOBR_RS02325 at 481.050 kb on - strand, within AZOBR_RS02325 at 481.055 kb on + strand, within AZOBR_RS02325 at 481.055 kb on + strand, within AZOBR_RS02325 at 481.056 kb on - strand, within AZOBR_RS02325 at 481.056 kb on - strand, within AZOBR_RS02325 at 481.143 kb on - strand, within AZOBR_RS02325 at 481.259 kb on + strand, within AZOBR_RS02325 at 481.307 kb on + strand, within AZOBR_RS02325 at 481.307 kb on + strand, within AZOBR_RS02325 at 481.308 kb on - strand, within AZOBR_RS02325 at 481.308 kb on - strand, within AZOBR_RS02325 at 481.308 kb on - strand, within AZOBR_RS02325 at 481.325 kb on + strand, within AZOBR_RS02325 at 481.335 kb on - strand, within AZOBR_RS02325 at 481.409 kb on + strand, within AZOBR_RS02325 at 482.236 kb on + strand at 482.237 kb on - strand at 482.237 kb on - strand at 482.237 kb on - strand at 482.237 kb on - strand at 482.237 kb on - strand at 482.413 kb on + strand at 482.413 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.3 mM remove 479,083 - -2.9 479,254 + +0.3 479,254 + -0.1 479,255 - +0.6 479,488 + AZOBR_RS02320 0.37 +0.8 479,488 + AZOBR_RS02320 0.37 +0.8 479,488 + AZOBR_RS02320 0.37 -0.9 479,488 + AZOBR_RS02320 0.37 -0.8 479,489 - AZOBR_RS02320 0.37 -0.3 479,489 - AZOBR_RS02320 0.37 -0.7 479,489 - AZOBR_RS02320 0.37 -0.1 479,578 + AZOBR_RS02320 0.49 +1.5 479,579 - AZOBR_RS02320 0.49 -0.7 479,587 + AZOBR_RS02320 0.50 -1.2 479,746 + AZOBR_RS02320 0.71 +0.3 479,746 + AZOBR_RS02320 0.71 -1.4 479,746 + AZOBR_RS02320 0.71 -0.9 479,747 - AZOBR_RS02320 0.71 +0.3 479,747 - AZOBR_RS02320 0.71 -0.7 479,747 - AZOBR_RS02320 0.71 -1.3 479,812 + AZOBR_RS02320 0.80 +1.7 479,813 - AZOBR_RS02320 0.80 +0.1 479,935 + -0.4 479,936 - -0.4 480,242 + AZOBR_RS02325 0.13 +0.2 480,242 + AZOBR_RS02325 0.13 +1.2 480,242 + AZOBR_RS02325 0.13 -0.8 480,242 + AZOBR_RS02325 0.13 +0.6 480,243 - AZOBR_RS02325 0.13 -0.9 480,243 - AZOBR_RS02325 0.13 +0.3 480,254 + AZOBR_RS02325 0.13 -0.2 480,254 + AZOBR_RS02325 0.13 +0.7 480,341 + AZOBR_RS02325 0.19 +0.0 480,341 + AZOBR_RS02325 0.19 -0.0 480,341 + AZOBR_RS02325 0.19 -0.5 480,342 - AZOBR_RS02325 0.19 +0.3 480,461 + AZOBR_RS02325 0.27 +0.2 480,462 - AZOBR_RS02325 0.27 +0.7 480,462 - AZOBR_RS02325 0.27 +1.8 480,686 + AZOBR_RS02325 0.42 +0.3 480,686 + AZOBR_RS02325 0.42 -0.3 480,686 + AZOBR_RS02325 0.42 +0.2 480,803 + AZOBR_RS02325 0.50 +0.1 480,804 - AZOBR_RS02325 0.50 +0.0 480,804 - AZOBR_RS02325 0.50 +0.4 481,028 + AZOBR_RS02325 0.65 +0.7 481,028 + AZOBR_RS02325 0.65 +1.3 481,050 - AZOBR_RS02325 0.66 +0.8 481,050 - AZOBR_RS02325 0.66 +0.3 481,055 + AZOBR_RS02325 0.66 -0.3 481,055 + AZOBR_RS02325 0.66 -4.3 481,056 - AZOBR_RS02325 0.67 -0.1 481,056 - AZOBR_RS02325 0.67 -0.7 481,143 - AZOBR_RS02325 0.72 +0.6 481,259 + AZOBR_RS02325 0.80 +1.9 481,307 + AZOBR_RS02325 0.83 -0.1 481,307 + AZOBR_RS02325 0.83 -1.0 481,308 - AZOBR_RS02325 0.83 +1.3 481,308 - AZOBR_RS02325 0.83 -0.3 481,308 - AZOBR_RS02325 0.83 +0.4 481,325 + AZOBR_RS02325 0.84 -0.4 481,335 - AZOBR_RS02325 0.85 -0.5 481,409 + AZOBR_RS02325 0.90 -1.8 482,236 + +0.5 482,237 - +0.1 482,237 - -0.2 482,237 - +0.0 482,237 - -0.5 482,237 - +1.0 482,413 + +2.0 482,413 + -0.7
Or see this region's nucleotide sequence