Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_20455

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
4,565,764	+				-0.7
4,565,765	-				+0.8
4,565,783	+				+0.4
4,565,783	+				+1.4
4,565,783	+				-0.1
4,565,783	+				-0.6
4,565,784	-				+0.8
4,565,784	-				+0.1
4,565,784	-				+0.7
4,565,784	-				-0.5
4,565,784	-				+1.3
4,565,784	-				+0.1
4,565,784	-				+0.2
4,565,856	+				-1.2
4,565,856	+				-0.7
4,565,856	+				-0.1
4,565,856	+				+1.2
4,565,856	+				+0.6
4,565,857	-				+1.0
4,565,857	-				+0.4
4,565,979	+		AO356_20445	0.52	-0.8
4,565,979	+		AO356_20445	0.52	-0.9
4,565,979	+		AO356_20445	0.52	-0.1
4,565,990	+		AO356_20445	0.58	-0.1
4,565,990	+		AO356_20445	0.58	-1.4
4,565,991	-		AO356_20445	0.58	-0.0
4,566,066	+				+0.2
4,566,067	-				-0.0
4,566,067	-				+0.6
4,566,106	-				-1.2
4,566,120	+				-1.0
4,566,120	+				+1.7
4,566,121	-				+1.6
4,566,121	-				+1.0
4,566,191	+				-0.6
4,566,192	-				-0.4
4,566,192	-				-0.2
4,566,243	+				-0.9
4,566,244	-				+0.6
4,566,335	+				+0.1
4,566,393	+		AO356_20450	0.15	-0.2
4,566,498	+		AO356_20450	0.46	-0.2
4,566,514	-		AO356_20450	0.51	+0.1
4,566,514	-		AO356_20450	0.51	+0.5
4,566,514	-		AO356_20450	0.51	+0.3
4,566,514	-		AO356_20450	0.51	+0.0
4,566,536	+		AO356_20450	0.58	-0.6
4,566,536	+		AO356_20450	0.58	-0.7
4,566,537	-		AO356_20450	0.58	+0.4
4,566,587	+		AO356_20450	0.73	+0.3
4,566,588	-		AO356_20450	0.73	-2.8
4,566,588	-		AO356_20450	0.73	-1.1
4,566,659	+				-0.8
4,566,659	+				-0.0
4,566,659	+				-1.8
4,566,659	+				+1.4
4,566,660	-				-0.1
4,566,660	-				+0.3
4,566,660	-				+0.3
4,566,660	-				+0.2
4,566,728	+				+0.9
4,566,744	+				-0.6
4,566,744	+				+0.8
4,566,744	+				-0.4
4,566,787	+				+1.0
4,566,831	+				-0.4
4,566,831	+				+1.2
4,566,831	+				+0.3
4,566,831	+				+1.3
4,566,832	-				-0.3
4,566,871	+				+0.3
4,567,114	+		AO356_20455	0.14	-1.4
4,567,115	-		AO356_20455	0.14	-0.7
4,567,184	-		AO356_20455	0.17	+1.1
4,567,482	+		AO356_20455	0.29	-0.5
4,567,482	+		AO356_20455	0.29	-3.4
4,567,483	-		AO356_20455	0.29	-0.2
4,567,785	+		AO356_20455	0.41	+0.0
4,567,785	+		AO356_20455	0.41	+3.0
4,567,785	+		AO356_20455	0.41	-1.9
4,567,785	+		AO356_20455	0.41	-0.6
4,567,785	+		AO356_20455	0.41	+0.5
4,567,785	+		AO356_20455	0.41	+0.7
4,567,785	+		AO356_20455	0.41	-0.8
4,567,785	+		AO356_20455	0.41	-0.0
4,567,786	-		AO356_20455	0.41	+0.6
4,567,786	-		AO356_20455	0.41	+0.0
4,567,786	-		AO356_20455	0.41	-0.4
4,567,786	-		AO356_20455	0.41	+0.2
4,567,786	-		AO356_20455	0.41	+0.8
4,568,031	+		AO356_20455	0.50	+0.9
4,568,031	+		AO356_20455	0.50	+0.1
4,568,052	+		AO356_20455	0.51	+0.6
4,568,061	+		AO356_20455	0.51	+0.5
4,568,061	+		AO356_20455	0.51	+0.7
4,568,061	+		AO356_20455	0.51	+0.1
4,568,061	+		AO356_20455	0.51	+0.8
4,568,062	-		AO356_20455	0.51	+0.9
4,568,062	-		AO356_20455	0.51	-0.7
4,568,076	-		AO356_20455	0.52	+1.6
4,568,076	-		AO356_20455	0.52	+0.2
4,568,084	-		AO356_20455	0.52	-0.1
4,568,084	-		AO356_20455	0.52	-0.1
4,568,084	-		AO356_20455	0.52	+0.3
4,568,091	+		AO356_20455	0.52	+0.2
4,568,092	-		AO356_20455	0.53	+0.3
4,568,259	+		AO356_20455	0.59	+0.8
4,568,259	+		AO356_20455	0.59	+0.3
4,568,259	+		AO356_20455	0.59	+1.0
4,568,260	-		AO356_20455	0.59	-0.2
4,568,260	-		AO356_20455	0.59	+0.2
4,568,260	-		AO356_20455	0.59	+0.1
4,568,263	-		AO356_20455	0.59	-0.4
4,568,263	-		AO356_20455	0.59	-1.4
4,568,298	+		AO356_20455	0.61	-0.3
4,568,298	+		AO356_20455	0.61	-0.3
4,568,299	-		AO356_20455	0.61	+0.1
4,568,375	-		AO356_20455	0.64	-0.3
4,568,463	+		AO356_20455	0.67	+0.7
4,568,463	+		AO356_20455	0.67	+0.7
4,568,464	-		AO356_20455	0.67	+0.4
4,568,496	+		AO356_20455	0.68	+2.1
4,568,497	-		AO356_20455	0.68	+1.0
4,568,514	+		AO356_20455	0.69	-1.0
4,568,514	+		AO356_20455	0.69	-0.6
4,568,514	+		AO356_20455	0.69	-0.4
4,568,514	+		AO356_20455	0.69	+0.0
4,568,515	-		AO356_20455	0.69	-0.4
4,568,594	-		AO356_20455	0.72	-0.3
4,568,594	-		AO356_20455	0.72	-0.3
4,568,594	-		AO356_20455	0.72	+0.5
4,568,624	+		AO356_20455	0.73	+1.0
4,568,624	+		AO356_20455	0.73	+0.5
4,568,625	-		AO356_20455	0.73	-0.9
4,568,625	-		AO356_20455	0.73	-0.2
4,568,626	+		AO356_20455	0.73	+0.2
4,568,627	-		AO356_20455	0.73	-0.4
4,568,706	+		AO356_20455	0.76	+0.2
4,568,706	+		AO356_20455	0.76	-0.8
4,568,729	+		AO356_20455	0.77	+0.2
4,568,745	+		AO356_20455	0.78	-1.4
4,568,746	-		AO356_20455	0.78	+0.8
4,568,746	-		AO356_20455	0.78	-1.5
4,568,746	-		AO356_20455	0.78	+0.1
4,568,746	-		AO356_20455	0.78	+0.2
4,568,746	-		AO356_20455	0.78	+0.7
4,568,857	+		AO356_20455	0.82	+0.2
4,568,857	+		AO356_20455	0.82	-0.7
4,568,857	-		AO356_20455	0.82	-1.5
4,568,858	-		AO356_20455	0.82	-0.7
4,568,858	-		AO356_20455	0.82	-0.6
4,568,858	-		AO356_20455	0.82	+1.3
4,568,858	-		AO356_20455	0.82	+0.3
4,568,858	-		AO356_20455	0.82	+0.9
4,569,061	+				-0.4
4,569,082	+				-0.2
4,569,082	+				+1.0
4,569,083	-				+0.6
4,569,111	+				+0.9
4,569,111	+				-0.5
4,569,112	-				-0.7
4,569,112	-				-0.2
4,569,114	+				+0.2
4,569,114	+				+1.3
4,569,114	+				+0.5
4,569,114	+				-0.6
4,569,114	+				-1.4
4,569,115	-				+0.2
4,569,115	-				-0.2
4,569,178	-				+0.2
4,569,178	-				-0.1
4,569,242	+				+0.7
4,569,242	+				+1.4
4,569,242	+				+1.0
4,569,242	+				-0.4
4,569,243	-				-1.7
4,569,243	-				+0.9
4,569,243	-				-0.7
4,569,243	-				+1.3
4,569,243	-				-1.2
4,569,252	+				-0.3
4,569,252	+				-0.4
4,569,252	+				+0.6
4,569,253	-				+0.7
4,569,253	-				+0.4
4,569,331	+				+0.6
4,569,331	+				+0.2
4,569,333	+				+0.4
4,569,333	+				-0.1
4,569,333	+				-2.6
4,569,333	+				-0.1
4,569,333	+				+0.6
4,569,334	-				+0.3
4,569,334	-				-0.1
4,569,378	+				-1.0
4,569,378	+				+1.0
4,569,379	-				+0.4
4,569,379	-				+0.3
4,569,409	-				+1.0
4,569,409	-				-0.4
4,569,409	-				-0.4
4,569,485	+				+0.3
4,569,485	+				+1.0
4,569,486	-				-0.6
4,569,499	+				-0.6
4,569,509	+				-0.3
4,569,510	-				-0.4
4,569,510	-				+1.4
4,569,527	+				+0.6
4,569,528	-				-2.1
4,569,544	+				-0.2
4,569,544	+				-0.3
4,569,544	+				+0.6
4,569,545	-				-0.5
4,569,545	-				-1.4
4,569,545	-				-0.0
4,569,708	+		AO356_20460	0.73	+1.2
4,569,708	+		AO356_20460	0.73	-0.1
4,569,709	-		AO356_20460	0.73	-0.6
4,569,709	-		AO356_20460	0.73	+0.6
4,569,709	-		AO356_20460	0.73	+0.3
4,569,709	-		AO356_20460	0.73	-0.6
4,569,764	-				+0.6
4,569,803	+		AO356_20465	0.10	+0.9
4,569,803	+		AO356_20465	0.10	-1.1
4,569,803	+		AO356_20465	0.10	+1.0
4,569,803	+		AO356_20465	0.10	+0.3
4,569,804	-		AO356_20465	0.11	-1.0
4,569,804	-		AO356_20465	0.11	-0.4
4,569,804	-		AO356_20465	0.11	+1.4
4,569,804	-		AO356_20465	0.11	-0.1
4,569,845	+		AO356_20465	0.25	-0.1
4,569,845	+		AO356_20465	0.25	+1.3
4,569,955	+		AO356_20465	0.63	+0.6
4,569,969	+		AO356_20465	0.68	+0.3
4,569,969	+		AO356_20465	0.68	-0.5
4,569,969	+		AO356_20465	0.68	-0.9
4,569,970	-		AO356_20465	0.68	-1.4
4,569,970	-		AO356_20465	0.68	-0.8
4,569,989	-		AO356_20465	0.75	-0.2
4,569,989	-		AO356_20465	0.75	-0.1
4,569,989	-		AO356_20465	0.75	-1.2
4,570,050	+				-1.6
4,570,051	-				-1.1
4,570,051	-				-2.5
4,570,110	-				-0.5
4,570,241	+		AO356_20470	0.71	+0.5
4,570,242	-		AO356_20470	0.72	+0.4
4,570,295	+				+1.0
4,570,296	-				-0.2
4,570,296	-				-1.6