Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4430

Experiment: BHIS with Dimethyl Sulfoxide 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 10 vol%
5,834,585	-		BT4429	0.28	+1.3
5,834,647	+		BT4429	0.33	-2.0
5,834,835	-		BT4429	0.50	-0.3
5,834,842	+		BT4429	0.50	-1.0
5,834,842	+		BT4429	0.50	+0.3
5,834,842	+		BT4429	0.50	+1.0
5,834,842	+		BT4429	0.50	+0.9
5,834,843	-		BT4429	0.50	-1.0
5,834,843	-		BT4429	0.50	-2.0
5,834,843	-		BT4429	0.50	-1.7
5,834,957	-		BT4429	0.60	-1.9
5,835,108	-		BT4429	0.74	-1.8
5,835,346	-				-1.3
5,835,361	+				-0.4
5,835,362	-				+1.2
5,835,464	-				-2.5
5,835,481	+				+0.3
5,835,557	-				-0.3
5,835,571	-				-0.0
5,835,702	+		BT4430	0.11	-0.0
5,835,890	+		BT4430	0.19	+0.3
5,835,936	+		BT4430	0.21	+0.5
5,835,937	-		BT4430	0.21	+2.7
5,836,045	+		BT4430	0.25	-0.1
5,836,054	+		BT4430	0.26	+1.3
5,836,242	-		BT4430	0.34	+0.3
5,836,464	+		BT4430	0.43	-1.9
5,836,465	-		BT4430	0.43	-1.5
5,836,534	+		BT4430	0.46	-1.0
5,836,648	-				+1.3
5,836,740	+		BT4430	0.54	+1.3
5,836,740	+		BT4430	0.54	+0.9
5,836,780	-		BT4430	0.56	-1.3
5,836,780	-		BT4430	0.56	-2.9
5,836,783	+		BT4430	0.56	-1.0
5,836,783	+		BT4430	0.56	+0.3
5,836,783	+		BT4430	0.56	-0.3
5,836,784	-		BT4430	0.56	-2.5
5,836,809	+		BT4430	0.57	+1.1
5,836,810	-		BT4430	0.57	+0.5
5,836,813	-		BT4430	0.57	+2.4
5,836,852	-		BT4430	0.59	+0.3
5,836,852	-		BT4430	0.59	+1.7
5,836,873	-		BT4430	0.59	+0.6
5,836,920	+		BT4430	0.61	+1.3
5,837,043	-		BT4430	0.66	+1.1
5,837,137	+		BT4430	0.70	+0.1
5,837,232	-		BT4430	0.74	+0.3
5,837,283	-		BT4430	0.76	+0.7
5,837,283	-		BT4430	0.76	-1.9
5,837,312	-		BT4430	0.78	-1.0
5,837,354	+		BT4430	0.79	-1.0
5,837,462	+		BT4430	0.84	-0.1
5,837,462	+		BT4430	0.84	+0.4
5,837,463	-		BT4430	0.84	-1.2
5,837,492	+		BT4430	0.85	-3.2
5,837,596	-		BT4430	0.89	+0.8
5,837,596	-		BT4430	0.89	+1.3
5,837,605	+		BT4430	0.90	-0.6
5,837,650	-				+1.7
5,837,666	-				-0.3
5,837,726	-				-1.3
5,837,851	+				-3.6
5,837,869	+				-2.0
5,837,913	-				-0.2
5,838,006	-				-2.0
5,838,109	+				-1.0
5,838,119	+				+0.1
5,838,175	-				-0.3
5,838,175	-				-1.5
5,838,246	+		BT4431	0.11	-0.1
5,838,248	+		BT4431	0.11	+0.3
5,838,324	+		BT4431	0.15	+0.3
5,838,374	+		BT4431	0.18	-0.4
5,838,375	-		BT4431	0.18	-2.9
5,838,376	+		BT4431	0.18	-0.0
5,838,376	+		BT4431	0.18	+0.7
5,838,376	+		BT4431	0.18	-2.6
5,838,377	-		BT4431	0.18	-2.3
5,838,379	-		BT4431	0.18	+0.7
5,838,381	-		BT4431	0.18	-0.8
5,838,547	-		BT4431	0.27	+1.3
5,838,635	+		BT4431	0.32	+0.7
5,838,635	+		BT4431	0.32	+2.3
5,838,720	-		BT4431	0.37	+0.9
5,838,745	+		BT4431	0.38	-2.5
5,838,763	+		BT4431	0.39	-0.7
5,838,853	-		BT4431	0.44	-0.3