Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2412

Experiment: BHIS with Dimethyl Sulfoxide 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 10 vol%
3,011,428	+				-0.8
3,011,433	-				-1.0
3,011,433	-				+0.4
3,011,433	-				+4.2
3,011,433	-				+1.4
3,011,433	-				-0.6
3,011,434	+				+1.0
3,011,435	-				-0.6
3,011,441	+				+1.1
3,011,504	-		BT2411	0.14	+0.7
3,011,507	+		BT2411	0.15	+0.4
3,011,508	-		BT2411	0.15	+0.1
3,011,508	-		BT2411	0.15	+0.8
3,011,508	-		BT2411	0.15	+0.8
3,011,711	-		BT2411	0.34	+1.5
3,011,772	-		BT2411	0.40	-1.1
3,011,813	+		BT2411	0.44	-2.4
3,011,813	+		BT2411	0.44	-3.9
3,011,813	+		BT2411	0.44	-1.2
3,011,813	+		BT2411	0.44	+2.4
3,011,813	+		BT2411	0.44	-1.0
3,011,813	+		BT2411	0.44	+0.6
3,011,866	+		BT2411	0.49	-2.2
3,011,988	+		BT2411	0.61	-0.8
3,012,012	-		BT2411	0.63	+0.8
3,012,092	+		BT2411	0.71	-1.0
3,012,092	+		BT2411	0.71	+1.0
3,012,095	-		BT2411	0.71	+1.2
3,012,095	-		BT2411	0.71	+3.4
3,012,106	+		BT2411	0.73	+0.7
3,012,107	-		BT2411	0.73	+1.5
3,012,107	-		BT2411	0.73	+0.7
3,012,153	+		BT2411	0.77	+0.5
3,012,177	-		BT2411	0.79	+0.5
3,012,179	-		BT2411	0.80	+1.9
3,012,255	-		BT2411	0.87	+1.5
3,012,255	-		BT2411	0.87	+0.8
3,012,330	-				+5.1
3,012,330	-				+1.6
3,012,366	-				-3.2
3,012,469	-				+0.2
3,012,472	-				-3.9
3,012,472	-				-3.8
3,012,484	-				+1.4
3,012,526	+				+1.0
3,012,586	-		BT2412	0.11	-1.8
3,012,660	+		BT2412	0.15	+0.3
3,012,664	+		BT2412	0.15	-2.3
3,012,665	-		BT2412	0.15	+0.2
3,012,665	-		BT2412	0.15	+0.7
3,012,730	+		BT2412	0.19	+0.8
3,012,859	+		BT2412	0.26	-1.5
3,012,932	-		BT2412	0.30	-2.8
3,012,996	-		BT2412	0.33	+0.2
3,013,037	+		BT2412	0.36	+0.6
3,013,037	+		BT2412	0.36	-1.2
3,013,171	+		BT2412	0.43	+1.8
3,013,249	+		BT2412	0.47	-2.8
3,013,249	+		BT2412	0.47	+1.4
3,013,423	+		BT2412	0.57	+1.1
3,013,430	+		BT2412	0.57	+0.9
3,013,431	-		BT2412	0.57	+0.3
3,013,454	+		BT2412	0.58	-2.0
3,013,467	+		BT2412	0.59	+1.4
3,013,467	+		BT2412	0.59	+2.7
3,013,468	-		BT2412	0.59	+1.7
3,013,468	-		BT2412	0.59	+1.4
3,013,553	-		BT2412	0.64	-2.0
3,013,686	+		BT2412	0.71	-1.6
3,013,687	-		BT2412	0.71	+1.8
3,013,701	+		BT2412	0.72	+0.4
3,013,701	+		BT2412	0.72	+0.8
3,013,702	-		BT2412	0.72	-0.7
3,013,702	-		BT2412	0.72	+0.7
3,013,707	-		BT2412	0.72	-2.7
3,013,724	+		BT2412	0.73	+1.4
3,013,871	-		BT2412	0.81	+0.7
3,014,022	+		BT2412	0.89	+1.1
3,014,022	+		BT2412	0.89	-1.5
3,014,022	+		BT2412	0.89	+1.6
3,014,027	-		BT2412	0.90	+0.4
3,014,038	-				-3.0
3,014,038	-				-1.2
3,014,038	-				+0.8
3,014,054	+				-0.7
3,014,122	+				+2.4
3,014,122	+				+1.5
3,014,124	+				-1.8
3,014,125	-				+0.6
3,014,125	-				-0.8
3,014,126	+				+2.9
3,014,127	-				-0.7
3,014,127	-				+0.4
3,014,150	-				-0.6
3,014,221	-				-3.0
3,014,221	-				-0.9
3,014,226	+				-1.8
3,014,235	-				-2.0
3,014,253	+				+1.2
3,014,335	+		BT2413	0.13	+1.6
3,014,335	+		BT2413	0.13	+1.1
3,014,342	+		BT2413	0.14	+1.5
3,014,343	-		BT2413	0.14	-0.5
3,014,390	+		BT2413	0.19	+1.5
3,014,408	+		BT2413	0.21	-2.0
3,014,469	+		BT2413	0.28	+3.4
3,014,469	+		BT2413	0.28	+0.5
3,014,469	+		BT2413	0.28	-1.7
3,014,469	+		BT2413	0.28	-1.6
3,014,470	-		BT2413	0.28	+1.7
3,014,471	+		BT2413	0.28	-2.8
3,014,472	-		BT2413	0.28	-1.1
3,014,472	-		BT2413	0.28	+0.5
3,014,539	+		BT2413	0.36	+2.4
3,014,539	+		BT2413	0.36	-2.3
3,014,540	-		BT2413	0.36	-2.4
3,014,567	+		BT2413	0.39	-2.0
3,014,567	+		BT2413	0.39	+1.9
3,014,568	-		BT2413	0.39	-0.4
3,014,568	-		BT2413	0.39	-2.6
3,014,682	-		BT2413	0.51	+0.2
3,014,707	+		BT2413	0.54	+0.6
3,014,707	+		BT2413	0.54	+2.7
3,014,707	+		BT2413	0.54	-0.9
3,014,710	-		BT2413	0.54	-0.3
3,014,712	-		BT2413	0.54	-1.4
3,014,713	+		BT2413	0.55	+1.6
3,014,714	-		BT2413	0.55	-2.4
3,014,718	+		BT2413	0.55	+2.5
3,014,719	-		BT2413	0.55	-0.3
3,014,771	+		BT2413	0.61	-2.9
3,014,772	-		BT2413	0.61	-0.9
3,014,864	+		BT2413	0.71	+2.9
3,014,877	+		BT2413	0.72	+0.6
3,014,885	-		BT2413	0.73	+1.4
3,014,904	+		BT2413	0.75	+1.2
3,014,904	+		BT2413	0.75	-2.3
3,014,985	+		BT2413	0.84	+1.0
3,014,985	+		BT2413	0.84	-0.2
3,015,058	-				-1.9
3,015,130	-				-0.8
3,015,138	+				+1.4
3,015,138	+				-1.6
3,015,139	-				-0.7
3,015,140	+				-1.0
3,015,140	+				+1.7
3,015,140	+				-2.6
3,015,141	-				-0.9
3,015,141	-				+2.4
3,015,141	-				+1.4
3,015,141	-				-0.6
3,015,143	+				-1.5
3,015,181	+				-0.9
3,015,182	-				+0.1
3,015,197	+				-0.6