Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2118

Experiment: nitrite 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 2.5 mM
2,231,487	+		Ga0059261_2117	0.46	-0.5
2,231,487	+		Ga0059261_2117	0.46	-1.0
2,231,487	+		Ga0059261_2117	0.46	-0.6
2,231,487	+		Ga0059261_2117	0.46	-1.3
2,231,487	+		Ga0059261_2117	0.46	-0.6
2,231,487	+				+0.9
2,231,487	+		Ga0059261_2117	0.46	+0.0
2,231,487	+		Ga0059261_2117	0.46	+0.1
2,231,487	+		Ga0059261_2117	0.46	+0.1
2,231,530	+		Ga0059261_2117	0.50	-1.6
2,231,530	+		Ga0059261_2117	0.50	-1.1
2,231,530	+		Ga0059261_2117	0.50	-0.1
2,231,530	+		Ga0059261_2117	0.50	+0.1
2,231,689	+		Ga0059261_2117	0.62	-0.7
2,231,689	+		Ga0059261_2117	0.62	-2.5
2,231,689	+		Ga0059261_2117	0.62	-0.0
2,231,689	+		Ga0059261_2117	0.62	-0.7
2,231,689	+		Ga0059261_2117	0.62	-0.3
2,231,689	+		Ga0059261_2117	0.62	-1.0
2,231,689	+		Ga0059261_2117	0.62	+0.9
2,231,690	-		Ga0059261_2117	0.62	-0.1
2,231,690	-		Ga0059261_2117	0.62	-0.5
2,231,690	-		Ga0059261_2117	0.62	-1.4
2,231,690	-		Ga0059261_2117	0.62	-2.3
2,231,690	-		Ga0059261_2117	0.62	+0.9
2,231,692	+		Ga0059261_2117	0.63	-0.7
2,231,692	+		Ga0059261_2117	0.63	-0.8
2,231,692	+		Ga0059261_2117	0.63	+1.9
2,231,693	-		Ga0059261_2117	0.63	-0.1
2,231,693	-		Ga0059261_2117	0.63	+0.1
2,231,693	-		Ga0059261_2117	0.63	+1.3
2,231,693	-		Ga0059261_2117	0.63	-2.7
2,231,693	-		Ga0059261_2117	0.63	-1.3
2,231,693	-		Ga0059261_2117	0.63	-0.6
2,231,731	+		Ga0059261_2117	0.66	-0.3
2,231,732	-		Ga0059261_2117	0.66	-0.0
2,231,732	-		Ga0059261_2117	0.66	+0.7
2,231,783	+		Ga0059261_2117	0.70	+0.9
2,231,783	+		Ga0059261_2117	0.70	+0.4
2,231,783	+		Ga0059261_2117	0.70	+0.1
2,231,784	-		Ga0059261_2117	0.70	-0.7
2,231,784	-		Ga0059261_2117	0.70	-0.8
2,231,784	-		Ga0059261_2117	0.70	-0.7
2,231,821	+		Ga0059261_2117	0.73	-0.6
2,231,822	-		Ga0059261_2117	0.73	-1.1
2,231,822	-		Ga0059261_2117	0.73	-0.5
2,231,822	-		Ga0059261_2117	0.73	+0.6
2,231,822	-		Ga0059261_2117	0.73	+0.3
2,231,880	+		Ga0059261_2117	0.78	-0.2
2,231,880	+		Ga0059261_2117	0.78	-0.3
2,231,880	+		Ga0059261_2117	0.78	-0.5
2,231,880	+		Ga0059261_2117	0.78	-1.0
2,231,880	+		Ga0059261_2117	0.78	-2.2
2,231,880	+		Ga0059261_2117	0.78	-0.8
2,231,880	+		Ga0059261_2117	0.78	-0.3
2,231,880	+		Ga0059261_2117	0.78	+0.9
2,231,881	-		Ga0059261_2117	0.78	-1.2
2,231,881	-		Ga0059261_2117	0.78	+0.9
2,231,881	-		Ga0059261_2117	0.78	-1.8
2,231,881	-		Ga0059261_2117	0.78	-0.2
2,231,881	-		Ga0059261_2117	0.78	-1.6
2,231,881	-		Ga0059261_2117	0.78	-0.4
2,231,901	+		Ga0059261_2117	0.80	+0.3
2,231,901	+		Ga0059261_2117	0.80	-2.8
2,231,902	-		Ga0059261_2117	0.80	-1.1
2,231,902	-		Ga0059261_2117	0.80	+0.3
2,231,906	+		Ga0059261_2117	0.80	-1.1
2,231,906	+		Ga0059261_2117	0.80	-1.7
2,231,906	+		Ga0059261_2117	0.80	+1.1
2,231,907	-		Ga0059261_2117	0.80	+0.1
2,231,907	-		Ga0059261_2117	0.80	-0.6
2,231,994	+		Ga0059261_2117	0.87	+0.4
2,231,995	-		Ga0059261_2117	0.87	+0.1
2,231,995	-		Ga0059261_2117	0.87	+0.4
2,231,995	-		Ga0059261_2117	0.87	+0.4
2,231,995	-		Ga0059261_2117	0.87	+0.9
2,232,026	+		Ga0059261_2117	0.90	-1.8
2,232,026	+		Ga0059261_2117	0.90	-0.5
2,232,026	+		Ga0059261_2117	0.90	+0.1
2,232,026	+		Ga0059261_2117	0.90	-0.7
2,232,026	+		Ga0059261_2117	0.90	-1.3
2,232,026	+		Ga0059261_2117	0.90	+0.5
2,232,027	-		Ga0059261_2117	0.90	+0.9
2,232,027	-		Ga0059261_2117	0.90	+0.4
2,232,027	-		Ga0059261_2117	0.90	+0.7
2,232,027	-		Ga0059261_2117	0.90	+0.9
2,232,027	-		Ga0059261_2117	0.90	-0.1
2,232,085	+				-1.8
2,232,086	-				+0.9
2,232,150	-				+1.1
2,232,177	+				-1.6
2,232,235	+				+0.4
2,232,235	+				-0.5
2,232,235	+				-0.7
2,232,235	+				+0.1
2,232,235	+				-1.0
2,232,235	+				-1.0
2,232,235	+				+0.9
2,232,235	+				+0.1
2,232,235	+				-0.8
2,232,235	+				-1.4
2,232,236	-				-0.1
2,232,236	-				+0.3
2,232,236	-				-1.4
2,232,236	-				-0.3
2,232,236	-				-0.3
2,232,236	-				-1.5
2,232,248	+				-0.8
2,232,249	-				-1.1
2,232,326	+				-0.4
2,232,327	-				-0.7
2,232,327	-				+0.5
2,232,327	-				+0.1
2,232,368	+				-0.8
2,232,369	-				+0.2
2,232,369	-				-0.8
2,232,369	-				-0.1
2,232,383	+				-0.6
2,232,383	+				-0.5
2,232,383	+				-0.6
2,232,383	+				-3.0
2,232,384	-				-0.6
2,232,384	-				-0.7
2,232,384	-				+0.9
2,232,384	-				+0.2
2,232,389	+				-0.5
2,232,389	+				-1.6
2,232,389	+				-0.1
2,232,389	+				-0.1
2,232,389	+				-0.2
2,232,389	+				+0.3
2,232,390	-				+0.9
2,232,390	-				-1.7
2,232,390	-				+0.0
2,232,390	-				+0.1
2,232,390	-				-0.6
2,232,390	-				-0.1
2,232,395	-				-1.3
2,232,435	+				-1.1
2,232,435	+				-1.4
2,232,436	-				-0.1
2,232,436	-				-0.8
2,232,441	+				-1.3
2,232,688	+		Ga0059261_2118	0.25	+0.4
2,232,688	+		Ga0059261_2118	0.25	-1.1
2,232,688	+		Ga0059261_2118	0.25	-0.6
2,232,688	+		Ga0059261_2118	0.25	-0.5
2,232,688	+		Ga0059261_2118	0.25	-2.0
2,232,688	+		Ga0059261_2118	0.25	+1.4
2,232,689	-		Ga0059261_2118	0.25	-1.5
2,232,689	-		Ga0059261_2118	0.25	+1.9
2,232,703	+		Ga0059261_2118	0.26	-1.3
2,232,703	+		Ga0059261_2118	0.26	-1.1
2,232,703	+		Ga0059261_2118	0.26	-1.1
2,232,704	-		Ga0059261_2118	0.27	-0.6
2,232,739	+		Ga0059261_2118	0.31	-0.3
2,232,818	-		Ga0059261_2118	0.40	-0.2
2,232,818	-		Ga0059261_2118	0.40	+0.9
2,232,865	-		Ga0059261_2118	0.45	+0.9
2,233,135	+		Ga0059261_2118	0.76	-2.8
2,233,135	+		Ga0059261_2118	0.76	+0.1
2,233,136	-		Ga0059261_2118	0.77	-0.1
2,233,136	-		Ga0059261_2118	0.77	-0.4
2,233,198	+		Ga0059261_2118	0.84	-1.0
2,233,198	+		Ga0059261_2118	0.84	-2.4
2,233,199	-		Ga0059261_2118	0.84	-1.8
2,233,199	-		Ga0059261_2118	0.84	-0.8
2,233,199	-		Ga0059261_2118	0.84	-1.3
2,233,199	-		Ga0059261_2118	0.84	-0.4
2,233,332	+				-1.3
2,233,336	+				-0.1
2,233,336	+				+0.9
2,233,336	+				+0.2
2,233,336	+				-0.9
2,233,336	+				-2.7
2,233,336	+				-1.0
2,233,336	+				-0.1
2,233,336	+				+0.3
2,233,336	+				-1.5
2,233,336	+				-0.5
2,233,336	+				-0.1
2,233,336	+				-0.0
2,233,336	+				-1.3
2,233,336	+				-0.2
2,233,336	+				+0.0
2,233,336	+				+0.3
2,233,336	+				+0.9
2,233,336	+				+0.4
2,233,336	+				-1.5
2,233,336	+				-0.4
2,233,336	+				-0.1
2,233,336	+				-2.0
2,233,336	+				+0.3
2,233,336	+				+0.2
2,233,337	-				+0.0
2,233,337	-				+1.3
2,233,337	-				-0.5
2,233,337	-				-0.8
2,233,337	-				-1.5
2,233,337	-				-0.3
2,233,337	-				-0.2
2,233,337	-				+1.9
2,233,337	-				-0.0
2,233,337	-				-0.0
2,233,337	-				+1.3
2,233,337	-				-0.8
2,233,337	-				-0.6
2,233,337	-				+1.9
2,233,337	-				-1.3
2,233,337	-				-0.7
2,233,337	-				-1.3
2,233,337	-				-0.8
2,233,337	-				-0.1
2,233,337	-				-2.0
2,233,337	-				-1.1
2,233,337	-				+0.1
2,233,337	-				+0.4
2,233,449	+		Ga0059261_2119	0.12	-2.2
2,233,449	+		Ga0059261_2119	0.12	+0.3
2,233,449	+				+1.3
2,233,449	+		Ga0059261_2119	0.12	+0.1
2,233,450	-		Ga0059261_2119	0.12	-0.5
2,233,542	+		Ga0059261_2119	0.22	-0.7
2,233,543	-		Ga0059261_2119	0.22	-0.1
2,233,543	-		Ga0059261_2119	0.22	+0.9
2,233,632	+		Ga0059261_2119	0.32	-1.1
2,233,632	+		Ga0059261_2119	0.32	-1.8
2,233,632	+		Ga0059261_2119	0.32	-0.5
2,233,633	-		Ga0059261_2119	0.32	-0.1
2,233,899	+		Ga0059261_2119	0.62	-0.5
2,233,899	+		Ga0059261_2119	0.62	-1.1
2,234,028	+		Ga0059261_2119	0.76	-2.5
2,234,220	+				-2.1
2,234,251	+				-0.4
2,234,251	+				-0.1
2,234,252	-				-1.5
2,234,252	-				-0.9
2,234,252	-				+0.5
2,234,299	+		Ga0059261_2120	0.26	-1.1
2,234,299	+		Ga0059261_2120	0.26	-0.5
2,234,299	+		Ga0059261_2120	0.26	+0.3
2,234,299	+		Ga0059261_2120	0.26	-1.3
2,234,299	+		Ga0059261_2120	0.26	-0.7
2,234,299	+		Ga0059261_2120	0.26	-1.9
2,234,299	+		Ga0059261_2120	0.26	+1.3
2,234,299	+		Ga0059261_2120	0.26	-0.5
2,234,299	+		Ga0059261_2120	0.26	-2.8
2,234,300	-		Ga0059261_2120	0.26	-0.9
2,234,300	-		Ga0059261_2120	0.26	+0.5