Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02862

Experiment: PYE with Cisplatin 0.0025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Cisplatin 0.0025 mg/ml
3,014,363	+				+1.5
3,014,365	-		CCNA_02861	0.48	-1.1
3,014,389	+		CCNA_02861	0.49	+1.0
3,014,458	-		CCNA_02861	0.52	-0.9
3,014,461	-		CCNA_02861	0.52	+0.5
3,014,474	+		CCNA_02861	0.52	-1.3
3,014,482	-		CCNA_02861	0.53	-1.1
3,014,511	+		CCNA_02861	0.54	-1.3
3,014,580	-		CCNA_02861	0.57	-0.3
3,014,580	-		CCNA_02861	0.57	-1.7
3,014,584	-		CCNA_02861	0.57	-0.1
3,014,597	-		CCNA_02861	0.57	-0.5
3,014,603	-		CCNA_02861	0.57	+0.6
3,014,624	-		CCNA_02861	0.58	+0.3
3,014,631	-		CCNA_02861	0.59	+0.1
3,014,686	+		CCNA_02861	0.61	+0.1
3,014,686	+		CCNA_02861	0.61	-0.5
3,014,694	-		CCNA_02861	0.61	-0.1
3,014,707	+		CCNA_02861	0.62	-0.9
3,014,709	-		CCNA_02861	0.62	+0.5
3,014,715	-		CCNA_02861	0.62	-1.7
3,014,715	-		CCNA_02861	0.62	+0.5
3,014,716	+		CCNA_02861	0.62	-1.0
3,014,779	-		CCNA_02861	0.64	-0.3
3,014,787	+		CCNA_02861	0.65	-1.0
3,014,787	+		CCNA_02861	0.65	-0.1
3,014,800	-		CCNA_02861	0.65	-0.7
3,014,830	+		CCNA_02861	0.66	-2.1
3,014,830	+		CCNA_02861	0.66	-0.7
3,014,908	+		CCNA_02861	0.69	+0.8
3,014,913	+		CCNA_02861	0.70	+1.5
3,014,916	-		CCNA_02861	0.70	-1.8
3,014,921	-		CCNA_02861	0.70	+0.1
3,014,921	-		CCNA_02861	0.70	+1.5
3,014,924	+		CCNA_02861	0.70	-1.7
3,014,934	+		CCNA_02861	0.70	-1.8
3,014,942	+		CCNA_02861	0.71	-1.1
3,014,950	-		CCNA_02861	0.71	+0.7
3,014,972	-		CCNA_02861	0.72	-0.9
3,015,036	+		CCNA_02861	0.75	-1.5
3,015,036	+		CCNA_02861	0.75	-0.9
3,015,044	-		CCNA_02861	0.75	-1.0
3,015,073	+		CCNA_02861	0.76	-1.5
3,015,081	-		CCNA_02861	0.76	-1.3
3,015,081	-		CCNA_02861	0.76	+1.5
3,015,082	-		CCNA_02861	0.76	+0.6
3,015,126	-		CCNA_02861	0.78	+0.3
3,015,126	-		CCNA_02861	0.78	-1.5
3,015,178	+		CCNA_02861	0.80	-0.1
3,015,185	-		CCNA_02861	0.80	+1.1
3,015,222	-		CCNA_02861	0.82	+0.5
3,015,227	-		CCNA_02861	0.82	+2.3
3,015,339	-				-1.1
3,015,342	+				-1.0
3,015,342	+				-0.6
3,015,350	-				+0.5
3,015,412	+				-1.0
3,015,412	+				-0.9
3,015,420	-				-0.1
3,015,427	+				-1.5
3,015,435	-				-0.1
3,015,481	+				-2.3
3,015,501	-				+1.5
3,015,514	+				-2.0
3,015,516	+				-1.9
3,015,516	+				-1.3
3,015,522	-				+1.5
3,015,524	-				+0.2
3,015,524	-				-0.9
3,015,573	+				-0.1
3,015,597	+				-1.3
3,015,611	+				-1.3
3,015,619	-				-0.5
3,015,669	+				-1.2
3,015,669	+				+0.5
3,015,669	+				+0.7
3,015,672	-				-1.2
3,015,674	+				-0.6
3,015,677	-				-0.1
3,015,677	-				-1.1
3,015,712	+		CCNA_02862	0.26	-0.1
3,015,712	+		CCNA_02862	0.26	+1.1
3,015,717	+		CCNA_02862	0.26	-1.1
3,015,720	-		CCNA_02862	0.26	-0.7
3,015,720	-		CCNA_02862	0.26	-0.1
3,015,720	-		CCNA_02862	0.26	-0.1
3,015,720	-		CCNA_02862	0.26	-1.3
3,015,720	-		CCNA_02862	0.26	-0.5
3,015,737	-		CCNA_02862	0.27	-0.7
3,015,792	-		CCNA_02862	0.31	-0.1
3,015,824	+		CCNA_02862	0.33	-2.1
3,015,840	+		CCNA_02862	0.34	-1.3
3,015,840	+		CCNA_02862	0.34	-0.3
3,015,840	+		CCNA_02862	0.34	-1.3
3,015,848	-		CCNA_02862	0.34	-1.1
3,015,848	-		CCNA_02862	0.34	-0.3
3,015,848	-		CCNA_02862	0.34	-2.1
3,015,848	-		CCNA_02862	0.34	-0.6
3,015,872	+		CCNA_02862	0.36	-1.5
3,015,874	-		CCNA_02862	0.36	-0.1
3,015,874	-		CCNA_02862	0.36	+0.7
3,015,879	-		CCNA_02862	0.36	+1.5
3,015,885	-		CCNA_02862	0.37	-1.9
3,015,910	+		CCNA_02862	0.38	-1.9
3,015,942	-		CCNA_02862	0.41	-0.3
3,015,955	+		CCNA_02862	0.41	-1.3
3,015,971	+		CCNA_02862	0.42	-2.0
3,015,981	+		CCNA_02862	0.43	-0.5
3,015,981	+		CCNA_02862	0.43	-0.5
3,015,989	-		CCNA_02862	0.44	-0.1
3,015,991	+		CCNA_02862	0.44	-0.5
3,015,997	-		CCNA_02862	0.44	-2.4
3,015,999	-		CCNA_02862	0.44	-2.1
3,016,022	+		CCNA_02862	0.46	-0.9
3,016,034	+		CCNA_02862	0.46	+0.5
3,016,034	+		CCNA_02862	0.46	-2.2
3,016,034	-		CCNA_02862	0.46	-1.1
3,016,039	+		CCNA_02862	0.47	-1.3
3,016,039	+		CCNA_02862	0.47	-1.3
3,016,047	-		CCNA_02862	0.47	-1.5
3,016,047	-		CCNA_02862	0.47	-0.7
3,016,047	-		CCNA_02862	0.47	-0.1
3,016,047	-		CCNA_02862	0.47	-1.7
3,016,047	-		CCNA_02862	0.47	-0.9
3,016,093	-		CCNA_02862	0.50	-1.3
3,016,114	-		CCNA_02862	0.52	+0.9
3,016,129	-		CCNA_02862	0.53	-0.9
3,016,136	-		CCNA_02862	0.53	-1.3
3,016,174	+		CCNA_02862	0.56	+1.5
3,016,174	+		CCNA_02862	0.56	-1.1
3,016,174	+		CCNA_02862	0.56	-0.5
3,016,181	-		CCNA_02862	0.56	-1.1
3,016,182	-		CCNA_02862	0.56	-0.5
3,016,187	-		CCNA_02862	0.56	-1.1
3,016,189	+		CCNA_02862	0.57	-0.9
3,016,189	+		CCNA_02862	0.57	+1.5
3,016,197	-		CCNA_02862	0.57	-0.1
3,016,241	-		CCNA_02862	0.60	-0.9
3,016,247	+		CCNA_02862	0.60	-0.1
3,016,247	+		CCNA_02862	0.60	-0.1
3,016,247	+		CCNA_02862	0.60	-1.1
3,016,255	-		CCNA_02862	0.61	-0.9
3,016,255	-		CCNA_02862	0.61	-1.0
3,016,255	-		CCNA_02862	0.61	-1.1
3,016,260	+		CCNA_02862	0.61	-0.5
3,016,260	+		CCNA_02862	0.61	+0.5
3,016,279	-		CCNA_02862	0.62	-0.9
3,016,294	+		CCNA_02862	0.63	+0.0
3,016,360	-		CCNA_02862	0.68	-0.9
3,016,362	+		CCNA_02862	0.68	-2.6
3,016,368	-		CCNA_02862	0.68	-1.7
3,016,370	-		CCNA_02862	0.68	-0.9
3,016,382	-		CCNA_02862	0.69	-0.7
3,016,382	-		CCNA_02862	0.69	+0.8
3,016,385	+		CCNA_02862	0.69	+0.5
3,016,434	+		CCNA_02862	0.72	+0.8
3,016,475	+		CCNA_02862	0.75	-1.1
3,016,493	+		CCNA_02862	0.76	-0.5
3,016,498	+		CCNA_02862	0.77	+0.5
3,016,581	+		CCNA_02862	0.82	-0.8
3,016,654	-		CCNA_02862	0.87	+1.5
3,016,671	-		CCNA_02862	0.88	+0.6
3,016,675	+		CCNA_02862	0.88	-2.2
3,016,678	-		CCNA_02862	0.88	+2.1
3,016,713	+				-1.7
3,016,713	+				-1.5
3,016,713	+				-2.2
3,016,713	+				-0.5
3,016,713	+				+0.5
3,016,713	+				-0.9
3,016,713	+				-1.1
3,016,713	+				-0.5
3,016,713	+				-0.5
3,016,713	+				-0.1
3,016,718	+				+1.5
3,016,721	-				+0.5
3,016,721	-				+0.8
3,016,721	-				-1.0
3,016,721	-				-1.8
3,016,721	-				+0.0
3,016,721	-				-1.1
3,016,721	-				-0.1
3,016,721	-				+1.0
3,016,721	-				-0.9
3,016,721	-				+0.8
3,016,728	+				-0.1
3,016,781	+				-0.9
3,016,845	+				+0.9
3,016,853	-				-2.5
3,016,858	+				+1.2
3,016,893	+				+0.2
3,016,902	+				-0.1
3,016,952	+				-1.5
3,016,976	-				-1.9
3,016,983	+				-1.1
3,016,987	+				-0.1
3,016,995	-				-2.0
3,016,999	+				-2.0
3,017,002	+				-1.3
3,017,010	-				-1.2
3,017,036	-				+0.6
3,017,080	+		CCNA_02863	0.15	+0.1
3,017,080	-		CCNA_02863	0.15	-2.9
3,017,088	-		CCNA_02863	0.17	+0.1
3,017,108	+		CCNA_02863	0.20	-1.3
3,017,129	+		CCNA_02863	0.23	+0.5
3,017,132	-		CCNA_02863	0.24	-1.1
3,017,144	+		CCNA_02863	0.26	-0.1
3,017,147	-		CCNA_02863	0.26	-1.5
3,017,183	+		CCNA_02863	0.32	+3.1
3,017,183	+		CCNA_02863	0.32	-3.0
3,017,234	-		CCNA_02863	0.40	+0.1
3,017,268	+		CCNA_02863	0.46	-0.5
3,017,283	+		CCNA_02863	0.48	-0.8
3,017,283	+		CCNA_02863	0.48	-0.5
3,017,311	-		CCNA_02863	0.52	+0.5
3,017,315	+		CCNA_02863	0.53	+0.1
3,017,364	+		CCNA_02863	0.61	-0.3
3,017,373	+		CCNA_02863	0.62	-1.0
3,017,378	+		CCNA_02863	0.63	-0.1
3,017,393	+		CCNA_02863	0.66	-1.8
3,017,422	+		CCNA_02863	0.70	-0.7
3,017,434	-		CCNA_02863	0.72	-1.1
3,017,506	-		CCNA_02863	0.84	-0.1
3,017,538	-		CCNA_02863	0.89	+0.0
3,017,543	-		CCNA_02863	0.90	+0.6
3,017,543	-		CCNA_02863	0.90	-0.5
3,017,560	+				+0.1
3,017,570	+				-0.6
3,017,578	-				-0.9
3,017,582	+				+0.5
3,017,608	-				-1.1
3,017,630	+				-1.3
3,017,648	+				+1.5
3,017,648	+				+1.5
3,017,697	-		CCNA_02864	0.15	-0.9
3,017,709	+		CCNA_02864	0.17	+0.5
3,017,709	+		CCNA_02864	0.17	-0.5
3,017,717	-		CCNA_02864	0.18	-2.1
3,017,717	-		CCNA_02864	0.18	-2.1
3,017,720	-		CCNA_02864	0.19	+1.4
3,017,726	-		CCNA_02864	0.20	-0.5
3,017,731	-		CCNA_02864	0.21	+1.2
3,017,773	-		CCNA_02864	0.27	+0.8
3,017,785	-		CCNA_02864	0.29	-0.3
3,017,792	+		CCNA_02864	0.30	-1.5
3,017,794	+		CCNA_02864	0.31	-1.1
3,017,837	+		CCNA_02864	0.37	-3.5