Experiment: Cobalt chloride 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS32325 and AZOBR_RS32335 are separated by 995 nucleotides AZOBR_RS32335 and AZOBR_RS29645 are separated by 90 nucleotides AZOBR_RS29645 and AZOBR_RS32340 are separated by 150 nucleotides
AZOBR_RS32325: AZOBR_RS32325 - Fructose PTS system (E-I, HPr, and E-IIA components) <small>(from data)</small>, at 619,076 to 621,616
_RS32325
AZOBR_RS32335: AZOBR_RS32335 - fructose-specific PTS system (fructose 1-phosphate forming), EII-B'BC components (FruA) <small>(from data)</small>, at 622,612 to 624,354
_RS32335
AZOBR_RS29645: AZOBR_RS29645 - suhB, at 624,445 to 624,522
_RS29645
AZOBR_RS32340: AZOBR_RS32340 - hypothetical protein, at 624,673 to 625,173
_RS32340
Position (kb) 622
623
624
625 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 622.083 kb on - strand at 622.083 kb on - strand at 622.083 kb on - strand at 622.083 kb on - strand at 622.989 kb on + strand, within AZOBR_RS32335 at 622.990 kb on - strand, within AZOBR_RS32335 at 622.990 kb on - strand, within AZOBR_RS32335 at 623.338 kb on + strand, within AZOBR_RS32335 at 623.338 kb on + strand, within AZOBR_RS32335 at 623.339 kb on - strand, within AZOBR_RS32335 at 623.339 kb on - strand, within AZOBR_RS32335 at 623.431 kb on + strand, within AZOBR_RS32335 at 623.431 kb on + strand, within AZOBR_RS32335 at 623.431 kb on + strand, within AZOBR_RS32335 at 623.432 kb on - strand, within AZOBR_RS32335 at 623.530 kb on + strand, within AZOBR_RS32335 at 623.531 kb on - strand, within AZOBR_RS32335 at 623.764 kb on + strand, within AZOBR_RS32335 at 623.764 kb on + strand, within AZOBR_RS32335 at 623.764 kb on + strand, within AZOBR_RS32335 at 623.765 kb on - strand, within AZOBR_RS32335 at 623.765 kb on - strand, within AZOBR_RS32335 at 623.765 kb on - strand, within AZOBR_RS32335 at 623.911 kb on + strand, within AZOBR_RS32335 at 624.266 kb on - strand at 624.390 kb on + strand at 624.390 kb on + strand at 624.457 kb on - strand, within AZOBR_RS29645 at 625.030 kb on + strand, within AZOBR_RS32340 at 625.030 kb on + strand, within AZOBR_RS32340 at 625.030 kb on + strand, within AZOBR_RS32340 at 625.031 kb on - strand, within AZOBR_RS32340 at 625.031 kb on - strand, within AZOBR_RS32340 at 625.124 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.2 mM remove 622,083 - +0.3 622,083 - -2.6 622,083 - -2.6 622,083 - -0.6 622,989 + AZOBR_RS32335 0.22 -0.8 622,990 - AZOBR_RS32335 0.22 -0.3 622,990 - AZOBR_RS32335 0.22 -1.0 623,338 + AZOBR_RS32335 0.42 -0.8 623,338 + AZOBR_RS32335 0.42 +0.8 623,339 - AZOBR_RS32335 0.42 +0.7 623,339 - AZOBR_RS32335 0.42 -0.3 623,431 + AZOBR_RS32335 0.47 -0.6 623,431 + AZOBR_RS32335 0.47 +0.9 623,431 + AZOBR_RS32335 0.47 -1.5 623,432 - AZOBR_RS32335 0.47 -0.2 623,530 + AZOBR_RS32335 0.53 -0.4 623,531 - AZOBR_RS32335 0.53 -2.9 623,764 + AZOBR_RS32335 0.66 +0.3 623,764 + AZOBR_RS32335 0.66 +0.2 623,764 + AZOBR_RS32335 0.66 +0.2 623,765 - AZOBR_RS32335 0.66 -1.0 623,765 - AZOBR_RS32335 0.66 -0.5 623,765 - AZOBR_RS32335 0.66 -1.2 623,911 + AZOBR_RS32335 0.75 +0.1 624,266 - -1.5 624,390 + -0.4 624,390 + +0.7 624,457 - AZOBR_RS29645 0.15 -0.7 625,030 + AZOBR_RS32340 0.71 -0.9 625,030 + AZOBR_RS32340 0.71 -0.1 625,030 + AZOBR_RS32340 0.71 +1.3 625,031 - AZOBR_RS32340 0.71 -0.6 625,031 - AZOBR_RS32340 0.71 -0.2 625,124 - -0.6
Or see this region's nucleotide sequence