Experiment: Cobalt chloride 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27150 and AZOBR_RS27155 are separated by 147 nucleotides AZOBR_RS27155 and AZOBR_RS27160 are separated by 82 nucleotides
AZOBR_RS27150: AZOBR_RS27150 - membrane protein, at 236,500 to 237,801
_RS27150
AZOBR_RS27155: AZOBR_RS27155 - hypothetical protein, at 237,949 to 238,422
_RS27155
AZOBR_RS27160: AZOBR_RS27160 - C4-dicarboxylate ABC transporter substrate-binding protein, at 238,505 to 239,488
_RS27160
Position (kb) 236
237
238 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 235.526 kb on - strand at 235.526 kb on - strand at 235.548 kb on - strand at 235.640 kb on + strand at 235.641 kb on - strand at 235.743 kb on - strand at 235.808 kb on + strand at 235.808 kb on + strand at 235.808 kb on + strand at 235.917 kb on - strand at 236.501 kb on + strand at 236.552 kb on + strand at 236.552 kb on + strand at 236.552 kb on + strand at 236.552 kb on + strand at 236.552 kb on + strand at 236.553 kb on - strand at 236.553 kb on - strand at 236.553 kb on - strand at 236.553 kb on - strand at 236.553 kb on - strand at 236.553 kb on - strand at 236.918 kb on + strand, within AZOBR_RS27150 at 236.918 kb on + strand, within AZOBR_RS27150 at 236.918 kb on + strand, within AZOBR_RS27150 at 236.918 kb on + strand, within AZOBR_RS27150 at 236.919 kb on - strand, within AZOBR_RS27150 at 236.919 kb on - strand, within AZOBR_RS27150 at 236.919 kb on - strand, within AZOBR_RS27150 at 236.919 kb on - strand, within AZOBR_RS27150 at 236.919 kb on - strand, within AZOBR_RS27150 at 237.045 kb on - strand, within AZOBR_RS27150 at 237.261 kb on - strand, within AZOBR_RS27150 at 237.384 kb on - strand, within AZOBR_RS27150 at 237.729 kb on - strand at 238.022 kb on + strand, within AZOBR_RS27155 at 238.022 kb on + strand, within AZOBR_RS27155 at 238.022 kb on + strand, within AZOBR_RS27155 at 238.022 kb on + strand, within AZOBR_RS27155 at 238.022 kb on + strand, within AZOBR_RS27155 at 238.023 kb on - strand, within AZOBR_RS27155 at 238.023 kb on - strand, within AZOBR_RS27155 at 238.062 kb on - strand, within AZOBR_RS27155 at 238.271 kb on + strand, within AZOBR_RS27155 at 238.272 kb on - strand, within AZOBR_RS27155 at 238.353 kb on - strand, within AZOBR_RS27155 at 238.506 kb on + strand at 238.506 kb on + strand at 238.506 kb on + strand at 238.507 kb on - strand at 238.569 kb on + strand at 238.569 kb on + strand at 238.569 kb on + strand at 238.569 kb on + strand at 238.569 kb on + strand at 238.569 kb on + strand at 238.570 kb on - strand at 238.570 kb on - strand at 238.570 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.2 mM remove 235,526 - -0.4 235,526 - -2.2 235,548 - -1.8 235,640 + +1.5 235,641 - -1.3 235,743 - +0.6 235,808 + +0.4 235,808 + +2.6 235,808 + -2.1 235,917 - +0.0 236,501 + -0.5 236,552 + -0.0 236,552 + -2.7 236,552 + -2.4 236,552 + +0.5 236,552 + -1.6 236,553 - +0.3 236,553 - +0.3 236,553 - +2.0 236,553 - +0.8 236,553 - -1.3 236,553 - -0.9 236,918 + AZOBR_RS27150 0.32 -1.0 236,918 + AZOBR_RS27150 0.32 +0.3 236,918 + AZOBR_RS27150 0.32 -1.3 236,918 + AZOBR_RS27150 0.32 -0.9 236,919 - AZOBR_RS27150 0.32 +0.0 236,919 - AZOBR_RS27150 0.32 -1.5 236,919 - AZOBR_RS27150 0.32 -0.5 236,919 - AZOBR_RS27150 0.32 +0.6 236,919 - AZOBR_RS27150 0.32 -1.8 237,045 - AZOBR_RS27150 0.42 +0.8 237,261 - AZOBR_RS27150 0.58 +0.2 237,384 - AZOBR_RS27150 0.68 +0.2 237,729 - -1.7 238,022 + AZOBR_RS27155 0.15 +0.2 238,022 + AZOBR_RS27155 0.15 +1.2 238,022 + AZOBR_RS27155 0.15 -0.5 238,022 + AZOBR_RS27155 0.15 +0.9 238,022 + AZOBR_RS27155 0.15 +1.3 238,023 - AZOBR_RS27155 0.16 -2.6 238,023 - AZOBR_RS27155 0.16 +0.4 238,062 - AZOBR_RS27155 0.24 +0.5 238,271 + AZOBR_RS27155 0.68 +0.1 238,272 - AZOBR_RS27155 0.68 -2.8 238,353 - AZOBR_RS27155 0.85 +0.0 238,506 + -1.4 238,506 + +0.6 238,506 + +0.5 238,507 - -1.3 238,569 + +0.4 238,569 + -0.4 238,569 + +0.9 238,569 + -0.9 238,569 + +0.4 238,569 + -1.9 238,570 - +0.7 238,570 - -1.1 238,570 - -0.9
Or see this region's nucleotide sequence