Experiment: Cobalt chloride 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS17965 and AZOBR_RS17970 are separated by 171 nucleotides
AZOBR_RS17965: AZOBR_RS17965 - ferrichrome receptor, at 788,334 to 790,487
_RS17965
AZOBR_RS17970: AZOBR_RS17970 - AraC family transcriptional regulator, at 790,659 to 791,543
_RS17970
Position (kb) 790
791
792 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 789.700 kb on + strand, within AZOBR_RS17965 at 789.701 kb on - strand, within AZOBR_RS17965 at 789.793 kb on + strand, within AZOBR_RS17965 at 789.793 kb on + strand, within AZOBR_RS17965 at 789.794 kb on - strand, within AZOBR_RS17965 at 789.830 kb on - strand, within AZOBR_RS17965 at 789.946 kb on + strand at 789.946 kb on + strand, within AZOBR_RS17965 at 789.946 kb on + strand, within AZOBR_RS17965 at 789.946 kb on + strand, within AZOBR_RS17965 at 789.947 kb on - strand, within AZOBR_RS17965 at 789.947 kb on - strand, within AZOBR_RS17965 at 789.947 kb on - strand, within AZOBR_RS17965 at 789.979 kb on + strand, within AZOBR_RS17965 at 789.980 kb on - strand, within AZOBR_RS17965 at 789.980 kb on - strand, within AZOBR_RS17965 at 789.980 kb on - strand, within AZOBR_RS17965 at 789.980 kb on - strand, within AZOBR_RS17965 at 790.027 kb on + strand, within AZOBR_RS17965 at 790.027 kb on + strand, within AZOBR_RS17965 at 790.028 kb on - strand, within AZOBR_RS17965 at 790.028 kb on - strand, within AZOBR_RS17965 at 790.028 kb on - strand, within AZOBR_RS17965 at 790.028 kb on - strand, within AZOBR_RS17965 at 790.057 kb on + strand, within AZOBR_RS17965 at 790.057 kb on + strand, within AZOBR_RS17965 at 790.058 kb on - strand, within AZOBR_RS17965 at 790.064 kb on - strand, within AZOBR_RS17965 at 790.064 kb on - strand, within AZOBR_RS17965 at 790.084 kb on + strand, within AZOBR_RS17965 at 790.309 kb on + strand at 790.310 kb on - strand at 790.478 kb on + strand at 790.478 kb on + strand at 790.507 kb on + strand at 790.507 kb on + strand at 790.951 kb on + strand, within AZOBR_RS17970 at 790.952 kb on - strand, within AZOBR_RS17970 at 790.952 kb on - strand, within AZOBR_RS17970 at 790.952 kb on - strand, within AZOBR_RS17970 at 791.062 kb on + strand, within AZOBR_RS17970 at 791.062 kb on + strand, within AZOBR_RS17970 at 791.287 kb on + strand, within AZOBR_RS17970 at 791.287 kb on + strand, within AZOBR_RS17970 at 791.287 kb on + strand, within AZOBR_RS17970 at 791.288 kb on - strand, within AZOBR_RS17970 at 791.288 kb on - strand, within AZOBR_RS17970 at 791.288 kb on - strand, within AZOBR_RS17970 at 791.288 kb on - strand, within AZOBR_RS17970 at 791.288 kb on - strand, within AZOBR_RS17970 at 791.288 kb on - strand, within AZOBR_RS17970 at 791.288 kb on - strand, within AZOBR_RS17970 at 791.288 kb on - strand, within AZOBR_RS17970 at 791.410 kb on + strand, within AZOBR_RS17970 at 791.410 kb on + strand, within AZOBR_RS17970 at 791.410 kb on + strand, within AZOBR_RS17970 at 791.410 kb on + strand, within AZOBR_RS17970 at 791.410 kb on + strand, within AZOBR_RS17970 at 791.410 kb on + strand, within AZOBR_RS17970 at 791.410 kb on + strand, within AZOBR_RS17970 at 791.410 kb on + strand, within AZOBR_RS17970 at 791.411 kb on - strand, within AZOBR_RS17970 at 791.411 kb on - strand, within AZOBR_RS17970 at 791.607 kb on + strand at 791.607 kb on + strand at 791.608 kb on - strand at 791.608 kb on - strand at 791.608 kb on - strand at 791.608 kb on - strand at 791.608 kb on - strand at 791.608 kb on - strand at 791.609 kb on + strand at 791.610 kb on - strand at 791.617 kb on + strand at 791.835 kb on + strand at 791.841 kb on + strand at 791.841 kb on + strand at 791.842 kb on - strand at 791.960 kb on - strand at 791.965 kb on - strand at 792.075 kb on + strand at 792.076 kb on - strand at 792.076 kb on - strand at 792.076 kb on - strand at 792.076 kb on - strand at 792.093 kb on + strand at 792.094 kb on - strand at 792.094 kb on - strand at 792.094 kb on - strand at 792.094 kb on - strand at 792.094 kb on - strand at 792.127 kb on - strand at 792.341 kb on + strand at 792.342 kb on - strand at 792.342 kb on - strand at 792.404 kb on + strand at 792.502 kb on + strand at 792.503 kb on - strand at 792.518 kb on + strand at 792.519 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.2 mM remove 789,700 + AZOBR_RS17965 0.63 +0.6 789,701 - AZOBR_RS17965 0.63 -1.3 789,793 + AZOBR_RS17965 0.68 -1.0 789,793 + AZOBR_RS17965 0.68 -0.6 789,794 - AZOBR_RS17965 0.68 -0.8 789,830 - AZOBR_RS17965 0.69 -0.8 789,946 + +2.4 789,946 + AZOBR_RS17965 0.75 +1.5 789,946 + AZOBR_RS17965 0.75 -0.4 789,946 + AZOBR_RS17965 0.75 +0.2 789,947 - AZOBR_RS17965 0.75 +0.2 789,947 - AZOBR_RS17965 0.75 -0.4 789,947 - AZOBR_RS17965 0.75 -0.9 789,979 + AZOBR_RS17965 0.76 +0.2 789,980 - AZOBR_RS17965 0.76 -1.4 789,980 - AZOBR_RS17965 0.76 -0.3 789,980 - AZOBR_RS17965 0.76 -1.8 789,980 - AZOBR_RS17965 0.76 +0.2 790,027 + AZOBR_RS17965 0.79 -0.6 790,027 + AZOBR_RS17965 0.79 -1.0 790,028 - AZOBR_RS17965 0.79 -0.0 790,028 - AZOBR_RS17965 0.79 +0.7 790,028 - AZOBR_RS17965 0.79 -2.5 790,028 - AZOBR_RS17965 0.79 +1.7 790,057 + AZOBR_RS17965 0.80 +0.1 790,057 + AZOBR_RS17965 0.80 -1.2 790,058 - AZOBR_RS17965 0.80 +1.4 790,064 - AZOBR_RS17965 0.80 +0.8 790,064 - AZOBR_RS17965 0.80 -0.6 790,084 + AZOBR_RS17965 0.81 +0.2 790,309 + -0.0 790,310 - -0.0 790,478 + -1.0 790,478 + -1.2 790,507 + +0.2 790,507 + -0.2 790,951 + AZOBR_RS17970 0.33 -1.0 790,952 - AZOBR_RS17970 0.33 -0.4 790,952 - AZOBR_RS17970 0.33 +0.8 790,952 - AZOBR_RS17970 0.33 +0.9 791,062 + AZOBR_RS17970 0.46 -2.7 791,062 + AZOBR_RS17970 0.46 -0.5 791,287 + AZOBR_RS17970 0.71 -2.2 791,287 + AZOBR_RS17970 0.71 -1.6 791,287 + AZOBR_RS17970 0.71 +0.0 791,288 - AZOBR_RS17970 0.71 +0.4 791,288 - AZOBR_RS17970 0.71 -2.1 791,288 - AZOBR_RS17970 0.71 -2.3 791,288 - AZOBR_RS17970 0.71 +0.5 791,288 - AZOBR_RS17970 0.71 +1.1 791,288 - AZOBR_RS17970 0.71 +0.0 791,288 - AZOBR_RS17970 0.71 +0.4 791,288 - AZOBR_RS17970 0.71 +0.7 791,410 + AZOBR_RS17970 0.85 -0.7 791,410 + AZOBR_RS17970 0.85 +1.6 791,410 + AZOBR_RS17970 0.85 -0.6 791,410 + AZOBR_RS17970 0.85 +0.0 791,410 + AZOBR_RS17970 0.85 -0.2 791,410 + AZOBR_RS17970 0.85 -0.9 791,410 + AZOBR_RS17970 0.85 -1.0 791,410 + AZOBR_RS17970 0.85 +0.1 791,411 - AZOBR_RS17970 0.85 -2.9 791,411 - AZOBR_RS17970 0.85 +0.2 791,607 + -0.8 791,607 + -0.5 791,608 - -1.0 791,608 - -0.6 791,608 - -0.6 791,608 - +0.1 791,608 - +0.4 791,608 - -0.6 791,609 + -1.2 791,610 - +0.1 791,617 + -0.9 791,835 + -0.5 791,841 + +0.6 791,841 + -1.0 791,842 - -0.2 791,960 - +1.4 791,965 - +0.7 792,075 + -0.6 792,076 - +2.4 792,076 - -0.9 792,076 - -1.5 792,076 - +0.7 792,093 + +0.5 792,094 - +1.1 792,094 - -0.1 792,094 - +0.6 792,094 - +0.5 792,094 - +0.9 792,127 - -0.1 792,341 + +0.4 792,342 - +0.3 792,342 - +0.7 792,404 + -0.2 792,502 + -2.9 792,503 - +1.4 792,518 + -0.3 792,519 - -1.8
Or see this region's nucleotide sequence