Experiment: Cobalt chloride 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS15245 and AZOBR_RS15250 are separated by 881 nucleotides AZOBR_RS15250 and AZOBR_RS15255 are separated by 852 nucleotides
AZOBR_RS15245: AZOBR_RS15245 - hypothetical protein, at 190,022 to 190,213
_RS15245
AZOBR_RS15250: AZOBR_RS15250 - nuclease, at 191,095 to 191,781
_RS15250
AZOBR_RS15255: AZOBR_RS15255 - hypothetical protein, at 192,634 to 192,873
_RS15255
Position (kb)
191
192 Strain fitness (log2 ratio)
-2
-1
0
1 at 190.168 kb on + strand, within AZOBR_RS15245 at 190.489 kb on - strand at 190.511 kb on + strand at 190.559 kb on + strand at 191.036 kb on + strand at 191.036 kb on + strand at 191.063 kb on + strand at 191.063 kb on + strand at 191.063 kb on + strand at 191.063 kb on + strand at 191.063 kb on + strand at 191.064 kb on - strand at 191.064 kb on - strand at 191.064 kb on - strand at 191.064 kb on - strand at 191.064 kb on - strand at 191.069 kb on + strand at 191.069 kb on + strand at 191.070 kb on - strand at 191.070 kb on - strand at 191.092 kb on - strand at 191.189 kb on + strand, within AZOBR_RS15250 at 191.190 kb on - strand, within AZOBR_RS15250 at 191.213 kb on + strand, within AZOBR_RS15250 at 191.213 kb on + strand, within AZOBR_RS15250 at 191.213 kb on + strand, within AZOBR_RS15250 at 191.213 kb on + strand, within AZOBR_RS15250 at 191.214 kb on - strand, within AZOBR_RS15250 at 191.214 kb on - strand, within AZOBR_RS15250 at 191.214 kb on - strand, within AZOBR_RS15250 at 191.214 kb on - strand, within AZOBR_RS15250 at 191.214 kb on - strand, within AZOBR_RS15250 at 191.214 kb on - strand, within AZOBR_RS15250 at 191.214 kb on - strand, within AZOBR_RS15250 at 191.423 kb on + strand, within AZOBR_RS15250 at 191.424 kb on - strand, within AZOBR_RS15250 at 191.435 kb on + strand, within AZOBR_RS15250 at 191.435 kb on + strand, within AZOBR_RS15250 at 191.435 kb on + strand, within AZOBR_RS15250 at 191.435 kb on + strand, within AZOBR_RS15250 at 191.435 kb on + strand, within AZOBR_RS15250 at 191.435 kb on + strand, within AZOBR_RS15250 at 191.445 kb on - strand, within AZOBR_RS15250 at 191.526 kb on - strand, within AZOBR_RS15250 at 192.006 kb on - strand at 192.160 kb on + strand at 192.422 kb on + strand at 192.467 kb on - strand at 192.766 kb on - strand, within AZOBR_RS15255 at 192.766 kb on - strand, within AZOBR_RS15255
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.2 mM remove 190,168 + AZOBR_RS15245 0.76 -0.6 190,489 - -0.7 190,511 + -1.6 190,559 + -0.5 191,036 + -0.4 191,036 + -1.7 191,063 + +0.1 191,063 + -0.8 191,063 + -1.2 191,063 + -0.0 191,063 + -0.5 191,064 - +0.3 191,064 - -1.3 191,064 - +0.0 191,064 - -0.3 191,064 - +0.3 191,069 + -0.6 191,069 + -1.6 191,070 - -0.8 191,070 - -2.7 191,092 - -0.8 191,189 + AZOBR_RS15250 0.14 -1.5 191,190 - AZOBR_RS15250 0.14 -0.7 191,213 + AZOBR_RS15250 0.17 -1.4 191,213 + AZOBR_RS15250 0.17 -0.1 191,213 + AZOBR_RS15250 0.17 -0.5 191,213 + AZOBR_RS15250 0.17 +0.1 191,214 - AZOBR_RS15250 0.17 -0.4 191,214 - AZOBR_RS15250 0.17 -0.8 191,214 - AZOBR_RS15250 0.17 -0.7 191,214 - AZOBR_RS15250 0.17 -1.3 191,214 - AZOBR_RS15250 0.17 -0.1 191,214 - AZOBR_RS15250 0.17 -1.7 191,214 - AZOBR_RS15250 0.17 -0.9 191,423 + AZOBR_RS15250 0.48 +0.1 191,424 - AZOBR_RS15250 0.48 +0.3 191,435 + AZOBR_RS15250 0.49 -1.1 191,435 + AZOBR_RS15250 0.49 -2.1 191,435 + AZOBR_RS15250 0.49 -0.5 191,435 + AZOBR_RS15250 0.49 -0.4 191,435 + AZOBR_RS15250 0.49 +0.0 191,435 + AZOBR_RS15250 0.49 -2.4 191,445 - AZOBR_RS15250 0.51 -1.1 191,526 - AZOBR_RS15250 0.63 -0.9 192,006 - -1.6 192,160 + -2.1 192,422 + -0.9 192,467 - -0.5 192,766 - AZOBR_RS15255 0.55 -0.1 192,766 - AZOBR_RS15255 0.55 -1.9
Or see this region's nucleotide sequence