Experiment: Cobalt chloride 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS12080 and AZOBR_RS12085 are separated by 843 nucleotides AZOBR_RS12085 and AZOBR_RS12090 are separated by 147 nucleotides AZOBR_RS12090 and AZOBR_RS12095 are separated by 72 nucleotides
AZOBR_RS12080: AZOBR_RS12080 - hypothetical protein, at 2,539,178 to 2,539,471
_RS12080
AZOBR_RS12085: AZOBR_RS12085 - chitooligosaccharide deacetylase, at 2,540,315 to 2,540,908
_RS12085
AZOBR_RS12090: AZOBR_RS12090 - hypothetical protein, at 2,541,056 to 2,541,451
_RS12090
AZOBR_RS12095: AZOBR_RS12095 - hypothetical protein, at 2,541,524 to 2,541,733
_RS12095
Position (kb)
2540
2541 Strain fitness (log2 ratio)
-2
-1
0
1 at 2539.342 kb on - strand, within AZOBR_RS12080 at 2539.342 kb on - strand, within AZOBR_RS12080 at 2539.342 kb on - strand, within AZOBR_RS12080 at 2540.223 kb on - strand at 2540.223 kb on - strand at 2540.445 kb on - strand, within AZOBR_RS12085 at 2540.813 kb on + strand, within AZOBR_RS12085 at 2540.813 kb on + strand, within AZOBR_RS12085 at 2541.057 kb on + strand at 2541.057 kb on + strand at 2541.058 kb on - strand at 2541.086 kb on + strand at 2541.087 kb on - strand at 2541.087 kb on - strand at 2541.087 kb on - strand at 2541.087 kb on - strand at 2541.087 kb on - strand at 2541.090 kb on + strand at 2541.090 kb on + strand at 2541.090 kb on + strand at 2541.090 kb on + strand at 2541.090 kb on + strand at 2541.091 kb on - strand at 2541.091 kb on - strand at 2541.091 kb on - strand at 2541.471 kb on + strand at 2541.471 kb on + strand at 2541.472 kb on - strand at 2541.483 kb on + strand at 2541.484 kb on - strand at 2541.484 kb on - strand at 2541.844 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.2 mM remove 2,539,342 - AZOBR_RS12080 0.56 +0.1 2,539,342 - AZOBR_RS12080 0.56 -0.1 2,539,342 - AZOBR_RS12080 0.56 -0.1 2,540,223 - +1.0 2,540,223 - -0.5 2,540,445 - AZOBR_RS12085 0.22 +1.7 2,540,813 + AZOBR_RS12085 0.84 +0.4 2,540,813 + AZOBR_RS12085 0.84 -0.1 2,541,057 + +0.4 2,541,057 + -0.7 2,541,058 - +1.4 2,541,086 + +0.4 2,541,087 - -0.5 2,541,087 - -0.1 2,541,087 - -0.0 2,541,087 - +0.0 2,541,087 - +0.3 2,541,090 + -0.2 2,541,090 + +1.1 2,541,090 + +1.7 2,541,090 + +1.5 2,541,090 + -2.1 2,541,091 - +0.1 2,541,091 - +0.4 2,541,091 - -1.2 2,541,471 + -0.0 2,541,471 + -0.3 2,541,472 - +0.2 2,541,483 + -0.5 2,541,484 - -0.8 2,541,484 - +0.5 2,541,844 - +0.1
Or see this region's nucleotide sequence