Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_18240

Experiment: nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 10 mM
4,111,351	-				-1.4
4,111,367	-				+0.1
4,111,390	-				-1.1
4,111,433	-				-0.2
4,111,433	-				+0.4
4,111,582	+				+0.9
4,111,582	+				+0.9
4,111,582	+				-0.0
4,111,582	+				+0.9
4,111,582	+				-1.8
4,111,582	+				-1.0
4,111,582	+				+0.5
4,111,582	+				+0.3
4,111,582	+				+0.4
4,111,582	+				+0.3
4,111,583	-				-0.1
4,111,583	-				+0.2
4,111,610	+				+0.9
4,111,610	+				-0.2
4,111,611	-				-0.1
4,111,611	-				+0.0
4,111,611	-				+1.0
4,111,611	-				+0.5
4,111,613	+				-1.0
4,111,613	+				+0.2
4,111,613	+				-1.2
4,111,613	+				-1.3
4,111,613	+				+0.4
4,111,613	+				-0.6
4,111,613	+				+0.4
4,111,613	+				+0.3
4,111,614	-				+1.5
4,111,614	-				+0.2
4,111,617	+		AO356_18240	0.10	+0.4
4,111,617	+		AO356_18240	0.10	+0.9
4,111,617	+		AO356_18240	0.10	+1.3
4,111,618	-		AO356_18240	0.10	+1.5
4,111,618	-		AO356_18240	0.10	-0.0
4,111,618	-		AO356_18240	0.10	-0.5
4,111,618	-		AO356_18240	0.10	-0.0
4,111,618	-		AO356_18240	0.10	+0.3
4,111,618	-		AO356_18240	0.10	-0.5
4,111,624	+		AO356_18240	0.11	+0.3
4,111,624	+		AO356_18240	0.11	-0.8
4,111,624	+		AO356_18240	0.11	+0.5
4,111,625	-		AO356_18240	0.11	+0.0
4,111,625	-		AO356_18240	0.11	+0.1
4,111,625	-		AO356_18240	0.11	+0.2
4,111,625	-		AO356_18240	0.11	+0.7
4,111,625	-		AO356_18240	0.11	-0.5
4,111,625	-		AO356_18240	0.11	-0.7
4,111,625	-		AO356_18240	0.11	-0.2
4,111,672	+		AO356_18240	0.18	-0.6
4,111,672	+		AO356_18240	0.18	+1.3
4,111,672	+		AO356_18240	0.18	-0.6
4,111,673	-		AO356_18240	0.18	+0.0
4,111,673	-		AO356_18240	0.18	-2.3
4,111,673	-		AO356_18240	0.18	-1.1
4,111,707	+		AO356_18240	0.22	+0.5
4,111,708	-		AO356_18240	0.22	-0.2
4,111,709	+		AO356_18240	0.23	+0.6
4,111,709	+		AO356_18240	0.23	-0.3
4,111,709	+		AO356_18240	0.23	-0.7
4,111,709	+		AO356_18240	0.23	+0.7
4,111,709	+		AO356_18240	0.23	+0.6
4,111,709	+		AO356_18240	0.23	+0.1
4,111,709	+		AO356_18240	0.23	+0.4
4,111,709	+		AO356_18240	0.23	-0.6
4,111,709	+		AO356_18240	0.23	-0.4
4,111,709	+		AO356_18240	0.23	-0.3
4,111,709	+		AO356_18240	0.23	+2.4
4,111,709	+		AO356_18240	0.23	+0.5
4,111,709	+		AO356_18240	0.23	+0.1
4,111,709	+		AO356_18240	0.23	+0.4
4,111,709	+		AO356_18240	0.23	-0.8
4,111,709	+		AO356_18240	0.23	-0.2
4,111,709	+		AO356_18240	0.23	-0.3
4,111,709	+		AO356_18240	0.23	+0.8
4,111,709	-		AO356_18240	0.23	+0.1
4,111,710	-		AO356_18240	0.23	+0.1
4,111,710	-		AO356_18240	0.23	-0.4
4,111,710	-		AO356_18240	0.23	+1.8
4,111,710	-		AO356_18240	0.23	-1.3
4,111,710	-		AO356_18240	0.23	-1.4
4,111,710	-		AO356_18240	0.23	-0.2
4,111,710	-		AO356_18240	0.23	-0.1
4,111,710	-		AO356_18240	0.23	-0.6
4,111,710	-		AO356_18240	0.23	-0.1
4,111,710	-		AO356_18240	0.23	+0.1
4,111,710	-		AO356_18240	0.23	-0.1
4,111,710	-		AO356_18240	0.23	+2.0
4,111,733	+		AO356_18240	0.26	+0.3
4,111,733	+		AO356_18240	0.26	+0.6
4,111,734	-		AO356_18240	0.26	+0.3
4,111,734	-		AO356_18240	0.26	+1.0
4,111,734	-		AO356_18240	0.26	+0.8
4,111,734	-		AO356_18240	0.26	+1.3
4,111,734	-		AO356_18240	0.26	+0.2
4,111,734	-		AO356_18240	0.26	+1.4
4,111,734	-		AO356_18240	0.26	+0.6
4,111,734	-		AO356_18240	0.26	+0.2
4,111,842	+		AO356_18240	0.41	+0.5
4,111,842	+		AO356_18240	0.41	-0.7
4,111,842	+		AO356_18240	0.41	+0.6
4,111,843	-		AO356_18240	0.41	+0.2
4,111,886	+		AO356_18240	0.47	+2.5
4,111,886	+		AO356_18240	0.47	-0.3
4,111,887	-		AO356_18240	0.47	+1.3
4,111,887	-		AO356_18240	0.47	+0.6
4,111,887	-		AO356_18240	0.47	-0.4
4,111,887	-		AO356_18240	0.47	-0.4
4,111,887	-		AO356_18240	0.47	+0.7
4,111,887	-		AO356_18240	0.47	-0.8
4,111,897	-		AO356_18240	0.48	-0.8
4,111,917	+		AO356_18240	0.51	+0.0
4,111,943	+		AO356_18240	0.54	-0.2
4,111,943	+		AO356_18240	0.54	+0.5
4,111,943	+		AO356_18240	0.54	+1.7
4,111,944	-		AO356_18240	0.55	-0.5
4,111,944	-		AO356_18240	0.55	-0.0
4,111,944	-		AO356_18240	0.55	+1.3
4,111,944	-		AO356_18240	0.55	+1.0
4,111,944	-		AO356_18240	0.55	+0.2
4,112,000	-		AO356_18240	0.62	-0.7
4,112,000	-		AO356_18240	0.62	+0.2
4,112,000	-		AO356_18240	0.62	+1.0
4,112,047	+		AO356_18240	0.69	+0.8
4,112,048	-		AO356_18240	0.69	-0.8
4,112,048	-		AO356_18240	0.69	+0.1
4,112,053	+		AO356_18240	0.69	+0.2
4,112,053	+		AO356_18240	0.69	+0.0
4,112,063	+		AO356_18240	0.71	+0.5
4,112,063	+		AO356_18240	0.71	-1.1
4,112,063	+		AO356_18240	0.71	+0.3
4,112,063	+		AO356_18240	0.71	+1.4
4,112,064	-		AO356_18240	0.71	-0.5
4,112,064	-		AO356_18240	0.71	-0.1
4,112,064	-		AO356_18240	0.71	+1.5
4,112,064	-		AO356_18240	0.71	+0.6
4,112,066	+		AO356_18240	0.71	+0.1
4,112,066	+		AO356_18240	0.71	-0.6
4,112,066	+		AO356_18240	0.71	+1.5
4,112,066	+		AO356_18240	0.71	+0.4
4,112,067	-		AO356_18240	0.71	+0.8
4,112,067	-		AO356_18240	0.71	-0.2
4,112,067	-		AO356_18240	0.71	+1.3
4,112,096	-		AO356_18240	0.75	-2.2
4,112,249	+				-0.7
4,112,264	-				-1.5
4,112,277	+				-0.4
4,112,277	+				+1.2
4,112,277	+				-0.6
4,112,277	+				+0.6
4,112,277	+				+0.4
4,112,277	+				-1.2
4,112,278	-				-0.5
4,112,278	-				+0.5
4,112,278	-				-1.3
4,112,278	-				-0.2
4,112,280	+				+0.0
4,112,280	+				-0.8
4,112,280	+				+1.7
4,112,280	+				-1.6
4,112,280	+				+0.5
4,112,280	+				+0.1
4,112,281	-				+0.9
4,112,281	-				-0.8
4,112,281	-				+0.5
4,112,281	-				-0.1
4,112,281	-				+0.3
4,112,281	-				+0.3
4,112,281	-				+0.3
4,112,281	-				-0.9
4,112,281	-				+0.2
4,112,283	+				+0.5
4,112,283	+				-0.4
4,112,283	+				-0.9
4,112,283	+				-0.4
4,112,283	+				+1.4
4,112,283	+				-0.2
4,112,284	-				+3.7
4,112,284	-				+0.0
4,112,284	-				+0.6
4,112,302	+				-0.6
4,112,302	+				+0.3
4,112,302	+				+0.1
4,112,302	+				-0.0
4,112,302	+				-1.0
4,112,303	-				+0.8
4,112,303	-				+0.6
4,112,311	+				+0.6
4,112,311	+				-0.4
4,112,312	-				+0.9
4,112,312	-				-1.3
4,112,312	-				-0.1
4,112,312	-				+0.6
4,112,312	-				+0.6
4,112,314	+				+0.2
4,112,314	+				+1.9
4,112,315	-				-1.7
4,112,315	-				-0.6
4,112,315	-				+0.3
4,112,315	-				+0.1
4,112,429	-				+0.2
4,112,445	-				-1.1
4,112,455	+				+1.7
4,112,456	-				-1.4
4,112,489	+				+1.2
4,112,489	+				+0.5
4,112,489	+				+0.7
4,112,489	+				-0.5
4,112,489	+				-2.2
4,112,489	+				-0.0
4,112,489	+				+0.0
4,112,490	-				+0.5
4,112,490	-				+0.5
4,112,490	-				+0.9
4,112,490	-				+0.3
4,112,701	+		AO356_18245	0.27	+1.6
4,112,701	+		AO356_18245	0.27	-1.4
4,112,823	+		AO356_18245	0.43	-0.1
4,112,823	+		AO356_18245	0.43	+0.1
4,112,823	+		AO356_18245	0.43	+0.9
4,112,823	+		AO356_18245	0.43	+0.4
4,112,824	-		AO356_18245	0.43	+0.6
4,113,055	+		AO356_18245	0.74	-0.3
4,113,055	+		AO356_18245	0.74	+0.8
4,113,082	+		AO356_18245	0.77	+1.4
4,113,171	+		AO356_18245	0.89	+1.3
4,113,171	+		AO356_18245	0.89	-1.1
4,113,172	-		AO356_18245	0.89	-0.8
4,113,199	+				-0.6
4,113,199	+				-0.4
4,113,199	+				-0.5
4,113,199	+				-0.9
4,113,200	-				+0.9
4,113,200	-				-0.4
4,113,277	-				-0.7