Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16375

Experiment: nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 10 mM
3,699,161	-		AO356_16365	0.69	-0.0
3,699,181	+		AO356_16365	0.72	-0.3
3,699,181	+		AO356_16365	0.72	-0.7
3,699,181	+		AO356_16365	0.72	-1.2
3,699,181	+		AO356_16365	0.72	-1.8
3,699,181	+		AO356_16365	0.72	-1.9
3,699,181	+		AO356_16365	0.72	-0.9
3,699,181	+		AO356_16365	0.72	-0.6
3,699,181	+		AO356_16365	0.72	-0.5
3,699,181	+		AO356_16365	0.72	-0.7
3,699,181	+		AO356_16365	0.72	+0.4
3,699,181	+		AO356_16365	0.72	-0.1
3,699,181	+		AO356_16365	0.72	+1.0
3,699,182	-		AO356_16365	0.72	+0.7
3,699,182	-		AO356_16365	0.72	+1.1
3,699,182	-		AO356_16365	0.72	+0.7
3,699,182	-		AO356_16365	0.72	+0.0
3,699,182	-		AO356_16365	0.72	+0.7
3,699,182	-		AO356_16365	0.72	+1.3
3,699,182	-		AO356_16365	0.72	+0.3
3,699,182	-		AO356_16365	0.72	-1.1
3,699,182	-		AO356_16365	0.72	-1.3
3,699,182	-		AO356_16365	0.72	+0.2
3,699,182	-		AO356_16365	0.72	-1.6
3,699,182	-		AO356_16365	0.72	+2.7
3,699,263	+		AO356_16365	0.84	+0.2
3,699,263	+		AO356_16365	0.84	+0.0
3,699,263	+		AO356_16365	0.84	+0.8
3,699,263	+		AO356_16365	0.84	+0.8
3,699,263	+		AO356_16365	0.84	-0.1
3,699,263	+		AO356_16365	0.84	-0.4
3,699,263	+		AO356_16365	0.84	+0.5
3,699,263	+		AO356_16365	0.84	-1.5
3,699,263	+		AO356_16365	0.84	+0.6
3,699,264	-		AO356_16365	0.84	-0.2
3,699,264	-		AO356_16365	0.84	+0.2
3,699,264	-		AO356_16365	0.84	-1.8
3,699,264	-		AO356_16365	0.84	+0.9
3,699,264	-		AO356_16365	0.84	+0.4
3,699,264	-		AO356_16365	0.84	-0.1
3,699,264	-		AO356_16365	0.84	-0.9
3,699,455	+		AO356_16370	0.13	+0.3
3,699,455	+		AO356_16370	0.13	+0.6
3,699,455	+		AO356_16370	0.13	-1.1
3,699,455	+		AO356_16370	0.13	+0.8
3,699,456	-		AO356_16370	0.13	+0.1
3,699,456	-		AO356_16370	0.13	-0.5
3,699,456	-		AO356_16370	0.13	+1.2
3,699,456	-		AO356_16370	0.13	+0.4
3,699,486	+		AO356_16370	0.17	-0.3
3,699,487	-		AO356_16370	0.17	+0.2
3,699,487	-		AO356_16370	0.17	+1.4
3,699,532	+		AO356_16370	0.23	-0.9
3,699,533	-		AO356_16370	0.23	+0.2
3,699,806	+		AO356_16370	0.61	+0.7
3,699,806	+		AO356_16370	0.61	+0.7
3,699,806	+		AO356_16370	0.61	+0.5
3,699,807	-		AO356_16370	0.61	-0.9
3,699,807	-		AO356_16370	0.61	-0.6
3,699,840	+		AO356_16370	0.66	+1.0
3,699,840	+		AO356_16370	0.66	+0.3
3,699,878	+		AO356_16370	0.71	-0.7
3,699,878	+		AO356_16370	0.71	-0.1
3,699,878	+		AO356_16370	0.71	-0.6
3,699,878	+		AO356_16370	0.71	-0.1
3,699,878	+		AO356_16370	0.71	-0.3
3,699,878	+		AO356_16370	0.71	-0.5
3,699,879	-		AO356_16370	0.71	-0.8
3,699,879	-		AO356_16370	0.71	-0.1
3,699,879	-		AO356_16370	0.71	-0.7
3,699,879	-		AO356_16370	0.71	+0.4
3,699,893	+		AO356_16370	0.73	-1.4
3,699,894	-		AO356_16370	0.73	+0.1
3,700,279	-		AO356_16375	0.15	-0.5
3,700,337	-		AO356_16375	0.21	-0.3
3,700,620	+		AO356_16375	0.52	-0.9
3,700,620	+		AO356_16375	0.52	+0.3
3,700,621	-		AO356_16375	0.52	-0.5
3,700,621	-		AO356_16375	0.52	-0.1
3,700,870	+		AO356_16375	0.79	-1.0
3,700,870	+		AO356_16375	0.79	+0.0
3,700,870	+		AO356_16375	0.79	+0.0
3,700,870	+		AO356_16375	0.79	+1.6
3,700,871	-		AO356_16375	0.79	+0.6
3,700,951	+		AO356_16375	0.88	+0.1
3,700,951	+		AO356_16375	0.88	-0.5
3,700,951	+		AO356_16375	0.88	+0.8
3,700,952	-		AO356_16375	0.88	+0.1
3,701,244	+		AO356_16380	0.50	-1.0
3,701,244	+		AO356_16380	0.50	+0.3
3,701,244	+		AO356_16380	0.50	+0.0
3,701,244	+		AO356_16380	0.50	+0.2
3,701,244	+		AO356_16380	0.50	-0.3
3,701,245	-		AO356_16380	0.51	-0.4
3,701,245	-		AO356_16380	0.51	-0.6
3,701,245	-		AO356_16380	0.51	-1.8
3,701,290	+		AO356_16380	0.63	-1.2
3,701,291	-		AO356_16380	0.64	-0.7
3,701,344	+		AO356_16380	0.78	-0.8
3,701,344	+		AO356_16380	0.78	+0.6
3,701,344	+		AO356_16380	0.78	+0.7
3,701,344	+		AO356_16380	0.78	-1.4
3,701,344	+		AO356_16380	0.78	+1.6
3,701,344	+		AO356_16380	0.78	-0.9
3,701,344	+		AO356_16380	0.78	-0.4
3,701,344	+		AO356_16380	0.78	+0.9
3,701,344	+		AO356_16380	0.78	+0.9
3,701,345	-		AO356_16380	0.79	-0.4
3,701,345	-		AO356_16380	0.79	-0.6
3,701,345	-		AO356_16380	0.79	+1.0
3,701,345	-		AO356_16380	0.79	-0.1
3,701,345	-		AO356_16380	0.79	-0.5
3,701,345	-		AO356_16380	0.79	-0.6
3,701,350	+		AO356_16380	0.80	+0.6
3,701,350	+		AO356_16380	0.80	+0.8
3,701,350	+		AO356_16380	0.80	+0.0
3,701,350	+		AO356_16380	0.80	+0.5
3,701,350	+		AO356_16380	0.80	+2.4
3,701,350	+		AO356_16380	0.80	-2.4
3,701,350	+		AO356_16380	0.80	+1.0
3,701,350	+		AO356_16380	0.80	+1.6
3,701,350	+		AO356_16380	0.80	-0.6
3,701,350	+		AO356_16380	0.80	+1.1
3,701,351	-		AO356_16380	0.80	+0.5
3,701,351	-		AO356_16380	0.80	+1.1
3,701,351	-		AO356_16380	0.80	+0.8
3,701,351	-		AO356_16380	0.80	-0.2
3,701,351	-		AO356_16380	0.80	-0.6
3,701,351	-		AO356_16380	0.80	-2.5
3,701,351	-		AO356_16380	0.80	+0.3
3,701,351	-		AO356_16380	0.80	-0.2
3,701,351	-		AO356_16380	0.80	-0.7
3,701,351	-		AO356_16380	0.80	+0.0
3,701,414	+				+0.3
3,701,414	+				-0.5
3,701,415	-				-1.1
3,701,415	-				-1.2
3,701,415	-				+1.1
3,701,415	-				+3.0
3,701,415	-				+0.5
3,701,415	-				-1.2
3,701,415	-				+0.8
3,701,415	-				-0.7
3,701,472	-				-1.0
3,701,514	-				+0.2
3,701,531	-				+0.5
3,701,703	+		AO356_16385	0.19	+0.1
3,701,703	+		AO356_16385	0.19	+1.0
3,701,703	+		AO356_16385	0.19	-0.8
3,701,703	+		AO356_16385	0.19	-0.7
3,701,703	+		AO356_16385	0.19	+1.1
3,701,704	-		AO356_16385	0.19	+0.6
3,701,704	-		AO356_16385	0.19	+0.1
3,701,704	-		AO356_16385	0.19	-0.9
3,701,704	-		AO356_16385	0.19	+0.6
3,701,704	-		AO356_16385	0.19	-1.2
3,701,734	+		AO356_16385	0.22	+1.1
3,701,734	+		AO356_16385	0.22	+0.1
3,701,734	+		AO356_16385	0.22	-1.2
3,701,735	-		AO356_16385	0.22	-0.7
3,702,062	+		AO356_16385	0.58	+1.2
3,702,062	+		AO356_16385	0.58	+0.6
3,702,063	-		AO356_16385	0.58	+1.5