Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_10260

Experiment: nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 10 mM
2,314,568	+		AO356_10255	0.22	+0.1
2,314,569	-		AO356_10255	0.22	-0.1
2,314,811	-		AO356_10255	0.41	+0.3
2,314,967	+		AO356_10255	0.54	-0.7
2,314,968	-		AO356_10255	0.54	+1.0
2,315,039	+		AO356_10255	0.60	+0.5
2,315,039	+		AO356_10255	0.60	+0.2
2,315,039	+		AO356_10255	0.60	-0.1
2,315,040	-		AO356_10255	0.60	+0.1
2,315,182	+		AO356_10255	0.71	-0.6
2,315,182	+		AO356_10255	0.71	-0.3
2,315,182	+		AO356_10255	0.71	-1.6
2,315,182	+		AO356_10255	0.71	-0.7
2,315,182	+		AO356_10255	0.71	+0.3
2,315,182	+		AO356_10255	0.71	+0.4
2,315,183	-		AO356_10255	0.71	-0.2
2,315,183	-		AO356_10255	0.71	-2.4
2,315,183	-		AO356_10255	0.71	+0.6
2,315,183	-		AO356_10255	0.71	+1.1
2,315,183	-		AO356_10255	0.71	-0.4
2,315,183	-		AO356_10255	0.71	+0.0
2,315,479	+				+0.2
2,315,479	+				-0.4
2,315,479	+				-1.0
2,315,480	-				-0.5
2,315,562	+				-0.5
2,315,562	+				+0.3
2,315,562	+				+0.6
2,315,562	+				+0.6
2,315,562	+				+0.4
2,315,562	+				-0.5
2,315,562	+				-0.8
2,315,562	+				+0.9
2,315,562	+				-0.1
2,315,562	+				-0.2
2,315,562	+				-0.9
2,315,563	-				-0.1
2,315,563	-				-1.6
2,315,563	-				-0.4
2,315,563	-				+1.0
2,315,563	-				-0.6
2,315,563	-				+0.2
2,315,563	-				+0.3
2,315,563	-				-0.5
2,315,563	-				+1.0
2,315,563	-				-0.6
2,315,563	-				+1.0
2,315,563	-				-1.1
2,315,563	-				-0.1
2,315,563	-				+0.5
2,315,722	+		AO356_10260	0.13	-1.2
2,315,737	+		AO356_10260	0.14	+0.3
2,315,738	-		AO356_10260	0.14	-0.4
2,315,775	-		AO356_10260	0.18	+1.1
2,315,790	-		AO356_10260	0.19	+0.9
2,315,790	-		AO356_10260	0.19	-0.6
2,315,790	-		AO356_10260	0.19	+0.8
2,315,790	-		AO356_10260	0.19	-1.7
2,315,790	-		AO356_10260	0.19	-0.1
2,315,790	-		AO356_10260	0.19	+0.6
2,315,790	-		AO356_10260	0.19	+1.3
2,315,848	-		AO356_10260	0.24	-0.5
2,315,848	-		AO356_10260	0.24	+0.5
2,315,901	+		AO356_10260	0.28	+1.9
2,315,902	-		AO356_10260	0.28	+0.6
2,316,006	+		AO356_10260	0.37	-0.6
2,316,030	+		AO356_10260	0.39	+0.6
2,316,030	+		AO356_10260	0.39	+0.4
2,316,044	+		AO356_10260	0.40	-0.8
2,316,044	+		AO356_10260	0.40	-0.6
2,316,044	+		AO356_10260	0.40	+1.7
2,316,045	-		AO356_10260	0.40	+0.7
2,316,045	-		AO356_10260	0.40	+0.1
2,316,045	-		AO356_10260	0.40	-0.0
2,316,045	-		AO356_10260	0.40	-1.3
2,316,045	-		AO356_10260	0.40	-0.9
2,316,048	+		AO356_10260	0.40	+0.3
2,316,048	+		AO356_10260	0.40	-0.2
2,316,048	+		AO356_10260	0.40	+0.2
2,316,048	+		AO356_10260	0.40	-0.5
2,316,048	+		AO356_10260	0.40	-0.4
2,316,048	+		AO356_10260	0.40	+0.1
2,316,049	-		AO356_10260	0.41	+0.8
2,316,049	-		AO356_10260	0.41	-1.1
2,316,049	-		AO356_10260	0.41	+0.8
2,316,049	-		AO356_10260	0.41	+0.0
2,316,049	-		AO356_10260	0.41	+0.1
2,316,049	-		AO356_10260	0.41	-1.5
2,316,049	-		AO356_10260	0.41	-0.5
2,316,049	-		AO356_10260	0.41	+0.4
2,316,049	-		AO356_10260	0.41	-1.8
2,316,049	-		AO356_10260	0.41	-1.3
2,316,059	+		AO356_10260	0.41	+0.4
2,316,059	+		AO356_10260	0.41	-0.6
2,316,060	-		AO356_10260	0.41	-0.3
2,316,204	+		AO356_10260	0.54	+0.9
2,316,204	+		AO356_10260	0.54	+0.4
2,316,204	+		AO356_10260	0.54	+0.3
2,316,204	+		AO356_10260	0.54	+0.7
2,316,204	+		AO356_10260	0.54	-0.5
2,316,204	+		AO356_10260	0.54	-0.6
2,316,204	+		AO356_10260	0.54	-0.6
2,316,205	-		AO356_10260	0.54	-0.3
2,316,205	-		AO356_10260	0.54	+2.0
2,316,205	-		AO356_10260	0.54	-0.4
2,316,321	+		AO356_10260	0.63	-0.4
2,316,322	-		AO356_10260	0.63	-0.9
2,316,568	+		AO356_10260	0.84	+1.1
2,316,696	+				+0.3
2,316,696	+				+0.4
2,316,717	+				+0.8
2,316,718	-				+1.3
2,316,718	-				+0.6
2,316,718	-				-1.0
2,316,718	-				-1.7
2,316,878	+				+0.1
2,316,879	-				-1.9
2,316,953	+		AO356_10265	0.14	-0.4
2,316,953	+		AO356_10265	0.14	+0.8
2,316,954	-		AO356_10265	0.14	-1.1
2,316,954	-		AO356_10265	0.14	+0.3
2,316,954	-		AO356_10265	0.14	+0.1
2,316,954	-		AO356_10265	0.14	-0.5
2,316,962	+		AO356_10265	0.15	-0.3
2,316,962	+		AO356_10265	0.15	+0.1
2,316,963	-		AO356_10265	0.15	+1.8
2,317,091	+		AO356_10265	0.24	+0.8
2,317,091	+		AO356_10265	0.24	-2.0
2,317,091	+		AO356_10265	0.24	+1.8
2,317,091	+		AO356_10265	0.24	+1.4
2,317,092	-		AO356_10265	0.24	-0.6
2,317,092	-		AO356_10265	0.24	+0.4
2,317,092	-		AO356_10265	0.24	+0.2
2,317,092	-		AO356_10265	0.24	+0.7
2,317,092	-		AO356_10265	0.24	-0.5
2,317,092	-		AO356_10265	0.24	-1.2
2,317,104	-		AO356_10265	0.25	-0.3
2,317,178	+		AO356_10265	0.30	-2.3
2,317,256	+		AO356_10265	0.36	-0.3
2,317,257	-		AO356_10265	0.36	+0.6
2,317,271	+		AO356_10265	0.37	+0.8
2,317,272	-		AO356_10265	0.37	-0.5
2,317,334	+		AO356_10265	0.42	+0.2
2,317,334	+		AO356_10265	0.42	+0.0
2,317,334	+		AO356_10265	0.42	+0.2
2,317,334	+		AO356_10265	0.42	+0.1
2,317,335	-		AO356_10265	0.42	-0.4
2,317,382	+		AO356_10265	0.45	-0.3
2,317,382	+		AO356_10265	0.45	-1.4
2,317,382	+		AO356_10265	0.45	+0.3
2,317,382	+		AO356_10265	0.45	+1.8
2,317,383	-		AO356_10265	0.45	+0.2
2,317,383	-		AO356_10265	0.45	+0.4
2,317,383	-		AO356_10265	0.45	-0.5
2,317,397	+		AO356_10265	0.46	-0.1
2,317,398	-		AO356_10265	0.46	+0.1
2,317,661	+		AO356_10265	0.65	+0.8
2,317,661	+		AO356_10265	0.65	-1.5
2,317,662	-		AO356_10265	0.65	-0.5
2,317,662	-		AO356_10265	0.65	-2.4
2,317,670	+		AO356_10265	0.66	-2.1
2,317,670	+		AO356_10265	0.66	+1.2
2,317,670	+		AO356_10265	0.66	+0.7
2,317,670	+		AO356_10265	0.66	+0.4
2,317,671	-		AO356_10265	0.66	-0.4
2,317,671	-		AO356_10265	0.66	-0.3
2,317,671	-		AO356_10265	0.66	-1.6
2,317,734	-		AO356_10265	0.71	+0.8
2,317,757	+		AO356_10265	0.72	+0.1
2,317,757	+		AO356_10265	0.72	-1.7