Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_07610

Experiment: nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 10 mM
1,683,929	+				+0.5
1,683,929	+				+0.2
1,683,929	+				-0.6
1,683,930	-				-0.4
1,683,930	-				+0.7
1,683,930	-				-0.0
1,683,930	-				+0.2
1,683,930	-				+0.7
1,683,930	-				-0.5
1,683,930	-				+1.0
1,683,930	-				+0.4
1,683,930	-				+0.1
1,683,964	+				+0.6
1,683,964	+				+0.0
1,683,965	-				+0.0
1,683,965	-				-0.1
1,683,965	-				+1.0
1,683,965	-				-0.0
1,683,968	+				-0.2
1,683,969	-				+0.6
1,683,969	-				-0.2
1,683,969	-				+2.0
1,683,969	-				-0.2
1,683,969	-				-0.5
1,683,969	-				+0.7
1,683,969	-				+1.2
1,683,969	-				-0.3
1,683,969	-				+0.4
1,683,970	+				-0.9
1,683,971	-				+1.1
1,683,971	-				+0.3
1,683,971	-				+0.5
1,683,971	-				+1.6
1,683,971	-				+0.1
1,683,971	-				-0.3
1,683,971	-				+1.1
1,684,062	+				+0.3
1,684,062	+				+0.6
1,684,062	+				+0.4
1,684,237	+		AO356_07605	0.26	+0.7
1,684,238	-		AO356_07605	0.26	-1.3
1,684,238	-		AO356_07605	0.26	-0.1
1,684,283	-		AO356_07605	0.32	+0.2
1,684,283	-		AO356_07605	0.32	-0.8
1,684,297	+		AO356_07605	0.34	+0.3
1,684,366	+		AO356_07605	0.43	-0.8
1,684,366	+		AO356_07605	0.43	+1.8
1,684,366	+		AO356_07605	0.43	+0.5
1,684,366	+		AO356_07605	0.43	-0.8
1,684,366	+		AO356_07605	0.43	-0.1
1,684,366	+		AO356_07605	0.43	-0.9
1,684,366	+		AO356_07605	0.43	+1.2
1,684,367	-		AO356_07605	0.43	-1.6
1,684,367	-		AO356_07605	0.43	+1.1
1,684,367	-		AO356_07605	0.43	-0.0
1,684,367	-		AO356_07605	0.43	-0.9
1,684,367	-		AO356_07605	0.43	-0.1
1,684,447	+		AO356_07605	0.53	+1.4
1,684,447	+		AO356_07605	0.53	+0.5
1,684,447	+		AO356_07605	0.53	-0.2
1,684,447	+		AO356_07605	0.53	+1.1
1,684,447	+		AO356_07605	0.53	-0.0
1,684,448	-		AO356_07605	0.54	+0.6
1,684,448	-		AO356_07605	0.54	-0.5
1,684,448	-		AO356_07605	0.54	-0.4
1,684,525	+		AO356_07605	0.64	+0.6
1,684,525	+		AO356_07605	0.64	+0.1
1,684,526	-		AO356_07605	0.64	-0.4
1,684,526	-		AO356_07605	0.64	-0.4
1,684,526	-		AO356_07605	0.64	-1.6
1,684,788	+				-0.0
1,684,788	+				+0.2
1,684,789	-				-0.9
1,684,841	+				+0.2
1,684,841	+				+0.2
1,684,841	+				-0.3
1,684,842	-				-1.8
1,684,842	-				+1.1
1,684,871	+				+0.5
1,684,875	-				-0.7
1,684,875	-				+0.0
1,684,905	-				+0.9
1,684,954	-				-0.3
1,684,954	-				-1.6
1,685,009	+				-0.1
1,685,136	+		AO356_07610	0.23	+0.7
1,685,137	-		AO356_07610	0.23	+0.2
1,685,223	+		AO356_07610	0.32	-0.0
1,685,224	-		AO356_07610	0.32	-0.7
1,685,224	-		AO356_07610	0.32	-0.8
1,685,224	-		AO356_07610	0.32	+0.1
1,685,224	-		AO356_07610	0.32	+0.6
1,685,238	+		AO356_07610	0.34	+0.1
1,685,238	+		AO356_07610	0.34	-1.0
1,685,238	+		AO356_07610	0.34	-0.8
1,685,239	-		AO356_07610	0.34	+0.1
1,685,502	+		AO356_07610	0.63	+2.2
1,685,502	+		AO356_07610	0.63	-0.5
1,685,502	+		AO356_07610	0.63	+0.3
1,685,502	+		AO356_07610	0.63	+0.4
1,685,502	+		AO356_07610	0.63	-0.5
1,685,502	+		AO356_07610	0.63	-0.2
1,685,502	+		AO356_07610	0.63	-0.3
1,685,502	+		AO356_07610	0.63	+0.8
1,685,503	-		AO356_07610	0.63	-1.4
1,685,503	-		AO356_07610	0.63	-0.3
1,685,503	-		AO356_07610	0.63	-0.3
1,685,503	-		AO356_07610	0.63	-1.6
1,685,503	-		AO356_07610	0.63	-0.0
1,685,589	-		AO356_07610	0.72	-0.2
1,685,789	+				+0.1
1,685,789	+				+0.5
1,685,789	+				-0.4
1,685,790	-				-1.1
1,685,877	+				-1.9
1,685,979	-				-0.6
1,686,073	+				-0.7
1,686,073	+				-0.8
1,686,073	+				-0.6
1,686,073	+				+1.3
1,686,077	+				-0.0
1,686,077	+				-0.7
1,686,077	+				-0.8
1,686,077	+				+0.1
1,686,078	-				-0.8
1,686,078	-				+0.5
1,686,122	-				-0.3
1,686,122	-				-0.1
1,686,132	+				-0.1
1,686,163	+				-0.2
1,686,163	+				+0.1
1,686,164	-				-1.0
1,686,178	+				-0.8
1,686,178	+				-0.3
1,686,179	-				+0.2
1,686,211	+				+0.3
1,686,211	+				-0.3
1,686,211	+				-0.5
1,686,211	+				+1.1
1,686,211	+				-0.7
1,686,212	-				-0.1
1,686,212	-				-0.2
1,686,212	-				+0.1
1,686,212	-				+1.2
1,686,212	-				+0.0
1,686,212	-				-0.5
1,686,299	-		AO356_07615	0.15	-0.9
1,686,335	+		AO356_07615	0.18	+0.8
1,686,335	+		AO356_07615	0.18	+1.3
1,686,336	-		AO356_07615	0.19	+0.2
1,686,336	-		AO356_07615	0.19	-0.3
1,686,336	-		AO356_07615	0.19	-1.2
1,686,385	+		AO356_07615	0.24	-1.2
1,686,385	+		AO356_07615	0.24	+0.8
1,686,385	+		AO356_07615	0.24	+0.7
1,686,385	+		AO356_07615	0.24	-0.2
1,686,386	-		AO356_07615	0.24	-2.0
1,686,595	+		AO356_07615	0.46	+0.4
1,686,598	+		AO356_07615	0.46	-0.8
1,686,598	+		AO356_07615	0.46	-0.4
1,686,598	+		AO356_07615	0.46	-0.2
1,686,598	+		AO356_07615	0.46	+0.5
1,686,599	-		AO356_07615	0.47	+1.3
1,686,599	-		AO356_07615	0.47	+0.3
1,686,709	+		AO356_07615	0.58	+1.4
1,686,709	+		AO356_07615	0.58	-0.5
1,686,709	+		AO356_07615	0.58	+0.7
1,686,709	+		AO356_07615	0.58	+0.1
1,686,709	+		AO356_07615	0.58	+0.2
1,686,709	+		AO356_07615	0.58	+0.4
1,686,709	+		AO356_07615	0.58	-0.5
1,686,709	+		AO356_07615	0.58	+0.1
1,686,710	-		AO356_07615	0.58	-0.9
1,686,710	-		AO356_07615	0.58	+0.3
1,686,710	-		AO356_07615	0.58	+0.4
1,686,710	-		AO356_07615	0.58	-0.9
1,686,710	-		AO356_07615	0.58	-0.0
1,686,710	-		AO356_07615	0.58	-1.3
1,686,710	-		AO356_07615	0.58	+0.6
1,686,799	+		AO356_07615	0.68	-0.1
1,686,800	-		AO356_07615	0.68	-0.3
1,686,800	-		AO356_07615	0.68	+0.6