Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2146 and DvMF_2147 are separated by 468 nucleotides DvMF_2147 and DvMF_2148 are separated by 335 nucleotides
DvMF_2146: DvMF_2146 - delta-1-pyrroline-5-carboxylate dehydrogenase (RefSeq), at 2,671,182 to 2,674,223
_2146
DvMF_2147: DvMF_2147 - zinc resistance-associated protein (RefSeq), at 2,674,692 to 2,675,231
_2147
DvMF_2148: DvMF_2148 - multi-sensor signal transduction histidine kinase (RefSeq), at 2,675,567 to 2,677,756
_2148
Position (kb)
2674
2675
2676 Strain fitness (log2 ratio)
-1
0
1
2 at 2673.725 kb on + strand, within DvMF_2146 at 2673.832 kb on + strand, within DvMF_2146 at 2673.871 kb on - strand, within DvMF_2146 at 2673.884 kb on - strand, within DvMF_2146 at 2673.891 kb on - strand, within DvMF_2146 at 2674.115 kb on - strand at 2674.115 kb on - strand at 2674.123 kb on + strand at 2674.248 kb on + strand at 2674.429 kb on + strand at 2674.960 kb on + strand, within DvMF_2147 at 2675.010 kb on - strand, within DvMF_2147 at 2675.324 kb on - strand at 2675.428 kb on + strand at 2675.602 kb on + strand at 2675.765 kb on + strand at 2675.830 kb on + strand, within DvMF_2148 at 2676.059 kb on + strand, within DvMF_2148 at 2676.059 kb on + strand, within DvMF_2148 at 2676.059 kb on + strand, within DvMF_2148 at 2676.163 kb on + strand, within DvMF_2148
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,673,725 + DvMF_2146 0.84 -0.3 2,673,832 + DvMF_2146 0.87 -0.7 2,673,871 - DvMF_2146 0.88 -0.0 2,673,884 - DvMF_2146 0.89 -1.5 2,673,891 - DvMF_2146 0.89 +2.4 2,674,115 - +0.6 2,674,115 - -1.3 2,674,123 + -0.6 2,674,248 + -0.7 2,674,429 + -0.1 2,674,960 + DvMF_2147 0.50 -0.0 2,675,010 - DvMF_2147 0.59 -0.7 2,675,324 - +1.0 2,675,428 + -0.3 2,675,602 + -0.9 2,675,765 + -0.4 2,675,830 + DvMF_2148 0.12 -1.1 2,676,059 + DvMF_2148 0.22 -0.9 2,676,059 + DvMF_2148 0.22 -0.2 2,676,059 + DvMF_2148 0.22 -0.5 2,676,163 + DvMF_2148 0.27 -0.4
Or see this region's nucleotide sequence