Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1985 and DvMF_1986 are separated by 377 nucleotides DvMF_1986 and DvMF_1987 are separated by 373 nucleotides
DvMF_1985: DvMF_1985 - hypothetical protein (RefSeq), at 2,457,073 to 2,457,792
_1985
DvMF_1986: DvMF_1986 - Superoxide dismutase (RefSeq), at 2,458,170 to 2,458,886
_1986
DvMF_1987: DvMF_1987 - Pyruvate, water dikinase (RefSeq), at 2,459,260 to 2,462,016
_1987
Position (kb)
2458
2459 Strain fitness (log2 ratio)
-2
-1
0
1 at 2457.228 kb on + strand, within DvMF_1985 at 2457.267 kb on - strand, within DvMF_1985 at 2457.303 kb on + strand, within DvMF_1985 at 2457.319 kb on - strand, within DvMF_1985 at 2457.399 kb on - strand, within DvMF_1985 at 2457.445 kb on + strand, within DvMF_1985 at 2457.495 kb on - strand, within DvMF_1985 at 2457.738 kb on + strand at 2457.738 kb on + strand at 2457.746 kb on + strand at 2457.830 kb on + strand at 2457.863 kb on + strand at 2458.011 kb on + strand at 2458.257 kb on + strand, within DvMF_1986 at 2458.498 kb on - strand, within DvMF_1986 at 2458.516 kb on - strand, within DvMF_1986 at 2458.529 kb on - strand, within DvMF_1986 at 2458.530 kb on - strand, within DvMF_1986 at 2458.746 kb on + strand, within DvMF_1986 at 2458.940 kb on + strand at 2458.985 kb on + strand at 2459.120 kb on + strand at 2459.357 kb on + strand at 2459.444 kb on + strand at 2459.592 kb on - strand, within DvMF_1987 at 2459.594 kb on + strand, within DvMF_1987 at 2459.602 kb on - strand, within DvMF_1987 at 2459.602 kb on - strand, within DvMF_1987 at 2459.770 kb on - strand, within DvMF_1987
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,457,228 + DvMF_1985 0.22 -0.7 2,457,267 - DvMF_1985 0.27 -0.5 2,457,303 + DvMF_1985 0.32 -1.0 2,457,319 - DvMF_1985 0.34 +0.6 2,457,399 - DvMF_1985 0.45 -0.2 2,457,445 + DvMF_1985 0.52 -1.2 2,457,495 - DvMF_1985 0.59 -0.2 2,457,738 + -0.4 2,457,738 + -0.8 2,457,746 + +0.3 2,457,830 + -0.3 2,457,863 + -0.9 2,458,011 + -0.6 2,458,257 + DvMF_1986 0.12 -1.1 2,458,498 - DvMF_1986 0.46 -0.2 2,458,516 - DvMF_1986 0.48 -0.5 2,458,529 - DvMF_1986 0.50 -0.6 2,458,530 - DvMF_1986 0.50 +1.0 2,458,746 + DvMF_1986 0.80 -0.8 2,458,940 + -0.3 2,458,985 + -2.0 2,459,120 + -0.6 2,459,357 + -0.8 2,459,444 + -1.3 2,459,592 - DvMF_1987 0.12 -2.7 2,459,594 + DvMF_1987 0.12 -0.4 2,459,602 - DvMF_1987 0.12 -1.0 2,459,602 - DvMF_1987 0.12 -1.9 2,459,770 - DvMF_1987 0.18 -1.2
Or see this region's nucleotide sequence