Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1819 and DvMF_1820 are separated by 482 nucleotides DvMF_1820 and DvMF_1821 are separated by 87 nucleotides DvMF_1821 and DvMF_1822 are separated by 199 nucleotides
DvMF_1819: DvMF_1819 - anaerobic ribonucleoside triphosphate reductase (RefSeq), at 2,219,503 to 2,221,413
_1819
DvMF_1820: DvMF_1820 - hypothetical protein (RefSeq), at 2,221,896 to 2,223,434
_1820
DvMF_1821: DvMF_1821 - Tir chaperone family protein (RefSeq), at 2,223,522 to 2,224,004
_1821
DvMF_1822: DvMF_1822 - aminotransferase class I and II (RefSeq), at 2,224,204 to 2,225,421
_1822
Position (kb)
2221
2222
2223
2224 Strain fitness (log2 ratio)
-2
-1
0
1 at 2220.931 kb on + strand, within DvMF_1819 at 2220.939 kb on - strand, within DvMF_1819 at 2220.969 kb on + strand, within DvMF_1819 at 2220.977 kb on - strand, within DvMF_1819 at 2221.034 kb on - strand, within DvMF_1819 at 2221.263 kb on - strand at 2221.635 kb on + strand at 2222.010 kb on - strand at 2222.208 kb on - strand, within DvMF_1820 at 2222.441 kb on + strand, within DvMF_1820 at 2222.518 kb on + strand, within DvMF_1820 at 2222.553 kb on + strand, within DvMF_1820 at 2222.602 kb on + strand, within DvMF_1820 at 2222.718 kb on + strand, within DvMF_1820 at 2222.795 kb on + strand, within DvMF_1820 at 2222.808 kb on - strand, within DvMF_1820 at 2222.914 kb on + strand, within DvMF_1820 at 2222.921 kb on + strand, within DvMF_1820 at 2222.949 kb on - strand, within DvMF_1820 at 2223.220 kb on + strand, within DvMF_1820 at 2223.277 kb on + strand, within DvMF_1820 at 2223.472 kb on + strand at 2223.480 kb on - strand at 2223.480 kb on - strand at 2223.655 kb on + strand, within DvMF_1821 at 2223.900 kb on + strand, within DvMF_1821 at 2224.072 kb on + strand at 2224.415 kb on - strand, within DvMF_1822
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,220,931 + DvMF_1819 0.75 -0.9 2,220,939 - DvMF_1819 0.75 -0.9 2,220,969 + DvMF_1819 0.77 -0.8 2,220,977 - DvMF_1819 0.77 -0.8 2,221,034 - DvMF_1819 0.80 +0.2 2,221,263 - -0.8 2,221,635 + -0.7 2,222,010 - +0.1 2,222,208 - DvMF_1820 0.20 -1.1 2,222,441 + DvMF_1820 0.35 -0.4 2,222,518 + DvMF_1820 0.40 -0.9 2,222,553 + DvMF_1820 0.43 -1.2 2,222,602 + DvMF_1820 0.46 -0.5 2,222,718 + DvMF_1820 0.53 -0.9 2,222,795 + DvMF_1820 0.58 +0.5 2,222,808 - DvMF_1820 0.59 -0.4 2,222,914 + DvMF_1820 0.66 -0.0 2,222,921 + DvMF_1820 0.67 -1.0 2,222,949 - DvMF_1820 0.68 -0.4 2,223,220 + DvMF_1820 0.86 -0.9 2,223,277 + DvMF_1820 0.90 -0.2 2,223,472 + -0.6 2,223,480 - -1.4 2,223,480 - -0.8 2,223,655 + DvMF_1821 0.28 -0.4 2,223,900 + DvMF_1821 0.78 -1.8 2,224,072 + -0.3 2,224,415 - DvMF_1822 0.17 -0.7
Or see this region's nucleotide sequence