Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1324 and DvMF_1325 are separated by 207 nucleotides DvMF_1325 and DvMF_1326 are separated by 236 nucleotides
DvMF_1324: DvMF_1324 - sigma54 specific transcriptional regulator, Fis family (RefSeq), at 1,616,435 to 1,617,487
_1324
DvMF_1325: DvMF_1325 - TPR repeat-containing protein (RefSeq), at 1,617,695 to 1,621,063
_1325
DvMF_1326: DvMF_1326 - protein of unknown function DUF52 (RefSeq), at 1,621,300 to 1,622,148
_1326
Position (kb)
1617
1618
1619
1620
1621
1622 Strain fitness (log2 ratio)
-1
0
1 at 1616.718 kb on + strand, within DvMF_1324 at 1616.951 kb on + strand, within DvMF_1324 at 1616.959 kb on - strand, within DvMF_1324 at 1616.960 kb on - strand, within DvMF_1324 at 1617.376 kb on + strand, within DvMF_1324 at 1618.103 kb on + strand, within DvMF_1325 at 1618.280 kb on - strand, within DvMF_1325 at 1618.294 kb on - strand, within DvMF_1325 at 1618.581 kb on - strand, within DvMF_1325 at 1618.795 kb on + strand, within DvMF_1325 at 1618.855 kb on + strand, within DvMF_1325 at 1618.875 kb on - strand, within DvMF_1325 at 1619.059 kb on + strand, within DvMF_1325 at 1619.115 kb on - strand, within DvMF_1325 at 1619.206 kb on + strand, within DvMF_1325 at 1619.311 kb on + strand, within DvMF_1325 at 1619.392 kb on + strand, within DvMF_1325 at 1619.499 kb on - strand, within DvMF_1325 at 1619.646 kb on - strand, within DvMF_1325 at 1619.843 kb on - strand, within DvMF_1325 at 1619.987 kb on + strand, within DvMF_1325 at 1619.992 kb on + strand, within DvMF_1325 at 1620.048 kb on + strand, within DvMF_1325 at 1620.124 kb on + strand, within DvMF_1325 at 1620.380 kb on - strand, within DvMF_1325 at 1620.551 kb on - strand, within DvMF_1325 at 1620.661 kb on - strand, within DvMF_1325 at 1620.886 kb on - strand at 1621.011 kb on + strand at 1621.065 kb on - strand at 1621.208 kb on + strand at 1621.271 kb on - strand at 1621.444 kb on - strand, within DvMF_1326 at 1621.510 kb on - strand, within DvMF_1326 at 1621.539 kb on + strand, within DvMF_1326 at 1621.547 kb on - strand, within DvMF_1326 at 1621.706 kb on + strand, within DvMF_1326 at 1621.714 kb on - strand, within DvMF_1326 at 1621.714 kb on - strand, within DvMF_1326 at 1621.714 kb on - strand, within DvMF_1326 at 1621.750 kb on - strand, within DvMF_1326 at 1621.785 kb on + strand, within DvMF_1326 at 1621.835 kb on + strand, within DvMF_1326 at 1621.958 kb on - strand, within DvMF_1326 at 1622.028 kb on + strand, within DvMF_1326
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,616,718 + DvMF_1324 0.27 +0.7 1,616,951 + DvMF_1324 0.49 +0.9 1,616,959 - DvMF_1324 0.50 +0.9 1,616,960 - DvMF_1324 0.50 +1.7 1,617,376 + DvMF_1324 0.89 +0.9 1,618,103 + DvMF_1325 0.12 +0.5 1,618,280 - DvMF_1325 0.17 +0.3 1,618,294 - DvMF_1325 0.18 +0.3 1,618,581 - DvMF_1325 0.26 -0.5 1,618,795 + DvMF_1325 0.33 +0.5 1,618,855 + DvMF_1325 0.34 +0.5 1,618,875 - DvMF_1325 0.35 +0.6 1,619,059 + DvMF_1325 0.40 +0.5 1,619,115 - DvMF_1325 0.42 +0.2 1,619,206 + DvMF_1325 0.45 +0.5 1,619,311 + DvMF_1325 0.48 +0.6 1,619,392 + DvMF_1325 0.50 +0.7 1,619,499 - DvMF_1325 0.54 +0.5 1,619,646 - DvMF_1325 0.58 -0.2 1,619,843 - DvMF_1325 0.64 +0.7 1,619,987 + DvMF_1325 0.68 +0.4 1,619,992 + DvMF_1325 0.68 +1.5 1,620,048 + DvMF_1325 0.70 +0.5 1,620,124 + DvMF_1325 0.72 +0.6 1,620,380 - DvMF_1325 0.80 +0.5 1,620,551 - DvMF_1325 0.85 +0.6 1,620,661 - DvMF_1325 0.88 +1.0 1,620,886 - +0.6 1,621,011 + -0.3 1,621,065 - -0.2 1,621,208 + -0.7 1,621,271 - -1.0 1,621,444 - DvMF_1326 0.17 +0.3 1,621,510 - DvMF_1326 0.25 -0.8 1,621,539 + DvMF_1326 0.28 +0.3 1,621,547 - DvMF_1326 0.29 +0.6 1,621,706 + DvMF_1326 0.48 +0.6 1,621,714 - DvMF_1326 0.49 -0.9 1,621,714 - DvMF_1326 0.49 -0.7 1,621,714 - DvMF_1326 0.49 -1.5 1,621,750 - DvMF_1326 0.53 -1.0 1,621,785 + DvMF_1326 0.57 -0.0 1,621,835 + DvMF_1326 0.63 -0.4 1,621,958 - DvMF_1326 0.78 -0.4 1,622,028 + DvMF_1326 0.86 -0.3
Or see this region's nucleotide sequence