Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1070 and DvMF_1071 are separated by 84 nucleotides DvMF_1071 and DvMF_1072 overlap by 4 nucleotides DvMF_1072 and DvMF_1073 are separated by 10 nucleotides DvMF_1073 and DvMF_1074 are separated by 701 nucleotides
DvMF_1070: DvMF_1070 - hypothetical protein (RefSeq), at 1,310,532 to 1,311,197
_1070
DvMF_1071: DvMF_1071 - hypothetical protein (RefSeq), at 1,311,282 to 1,311,773
_1071
DvMF_1072: DvMF_1072 - hypothetical protein (RefSeq), at 1,311,770 to 1,313,557
_1072
DvMF_1073: DvMF_1073 - hypothetical protein (RefSeq), at 1,313,568 to 1,313,795
_1073
DvMF_1074: DvMF_1074 - hypothetical protein (RefSeq), at 1,314,497 to 1,315,180
_1074
Position (kb)
1311
1312
1313
1314 Strain fitness (log2 ratio)
-2
-1
0
1 at 1310.872 kb on + strand, within DvMF_1070 at 1310.882 kb on + strand, within DvMF_1070 at 1310.882 kb on + strand, within DvMF_1070 at 1310.971 kb on - strand, within DvMF_1070 at 1311.046 kb on - strand, within DvMF_1070 at 1311.319 kb on + strand at 1311.645 kb on - strand, within DvMF_1071 at 1311.646 kb on - strand, within DvMF_1071 at 1311.810 kb on - strand at 1311.846 kb on - strand at 1311.881 kb on + strand at 1311.978 kb on + strand, within DvMF_1072 at 1312.062 kb on + strand, within DvMF_1072 at 1312.353 kb on + strand, within DvMF_1072 at 1312.377 kb on + strand, within DvMF_1072 at 1312.385 kb on - strand, within DvMF_1072 at 1312.533 kb on + strand, within DvMF_1072 at 1312.541 kb on - strand, within DvMF_1072 at 1312.680 kb on - strand, within DvMF_1072 at 1312.776 kb on - strand, within DvMF_1072 at 1312.805 kb on + strand, within DvMF_1072 at 1312.842 kb on - strand, within DvMF_1072 at 1313.151 kb on + strand, within DvMF_1072 at 1313.542 kb on + strand at 1313.701 kb on + strand, within DvMF_1073 at 1313.709 kb on - strand, within DvMF_1073 at 1313.709 kb on - strand, within DvMF_1073 at 1314.078 kb on + strand at 1314.142 kb on - strand at 1314.152 kb on - strand at 1314.208 kb on + strand at 1314.240 kb on + strand at 1314.240 kb on + strand at 1314.248 kb on - strand at 1314.280 kb on + strand at 1314.288 kb on - strand at 1314.288 kb on - strand at 1314.433 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,310,872 + DvMF_1070 0.51 -1.0 1,310,882 + DvMF_1070 0.53 -0.3 1,310,882 + DvMF_1070 0.53 -1.5 1,310,971 - DvMF_1070 0.66 -0.9 1,311,046 - DvMF_1070 0.77 -1.1 1,311,319 + -0.9 1,311,645 - DvMF_1071 0.74 -1.3 1,311,646 - DvMF_1071 0.74 -0.9 1,311,810 - -0.9 1,311,846 - -0.8 1,311,881 + +0.6 1,311,978 + DvMF_1072 0.12 -0.5 1,312,062 + DvMF_1072 0.16 +0.1 1,312,353 + DvMF_1072 0.33 +0.7 1,312,377 + DvMF_1072 0.34 -0.3 1,312,385 - DvMF_1072 0.34 -0.9 1,312,533 + DvMF_1072 0.43 -0.1 1,312,541 - DvMF_1072 0.43 -1.2 1,312,680 - DvMF_1072 0.51 -1.5 1,312,776 - DvMF_1072 0.56 -0.3 1,312,805 + DvMF_1072 0.58 -0.5 1,312,842 - DvMF_1072 0.60 -0.8 1,313,151 + DvMF_1072 0.77 +0.8 1,313,542 + -0.7 1,313,701 + DvMF_1073 0.58 -0.4 1,313,709 - DvMF_1073 0.62 -0.5 1,313,709 - DvMF_1073 0.62 -1.1 1,314,078 + -0.4 1,314,142 - +0.0 1,314,152 - -1.9 1,314,208 + -0.7 1,314,240 + +0.5 1,314,240 + -1.4 1,314,248 - -1.1 1,314,280 + -0.4 1,314,288 - -1.2 1,314,288 - -0.6 1,314,433 - +0.1
Or see this region's nucleotide sequence