Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1040 and DvMF_1041 are separated by 213 nucleotides DvMF_1041 and DvMF_1042 are separated by 20 nucleotides
DvMF_1040: DvMF_1040 - PhoH family protein (RefSeq), at 1,263,736 to 1,265,313
_1040
DvMF_1041: DvMF_1041 - monofunctional biosynthetic peptidoglycan transglycosylase (RefSeq), at 1,265,527 to 1,266,822
_1041
DvMF_1042: DvMF_1042 - hypothetical protein (RefSeq), at 1,266,843 to 1,267,562
_1042
Position (kb)
1265
1266
1267 Strain fitness (log2 ratio)
-2
-1
0
1 at 1264.586 kb on - strand, within DvMF_1040 at 1264.748 kb on - strand, within DvMF_1040 at 1264.749 kb on - strand, within DvMF_1040 at 1264.756 kb on + strand, within DvMF_1040 at 1264.981 kb on - strand, within DvMF_1040 at 1265.003 kb on - strand, within DvMF_1040 at 1265.052 kb on - strand, within DvMF_1040 at 1265.114 kb on + strand, within DvMF_1040 at 1265.173 kb on + strand at 1265.181 kb on - strand at 1265.181 kb on - strand at 1265.608 kb on - strand at 1265.633 kb on + strand at 1266.270 kb on + strand, within DvMF_1041 at 1266.308 kb on + strand, within DvMF_1041 at 1266.688 kb on - strand, within DvMF_1041 at 1266.763 kb on + strand at 1266.769 kb on - strand at 1266.936 kb on - strand, within DvMF_1042 at 1267.327 kb on - strand, within DvMF_1042 at 1267.530 kb on - strand at 1267.578 kb on - strand at 1267.698 kb on - strand at 1267.698 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,264,586 - DvMF_1040 0.54 -0.6 1,264,748 - DvMF_1040 0.64 -1.3 1,264,749 - DvMF_1040 0.64 +0.2 1,264,756 + DvMF_1040 0.65 -1.2 1,264,981 - DvMF_1040 0.79 +0.1 1,265,003 - DvMF_1040 0.80 -0.7 1,265,052 - DvMF_1040 0.83 -0.4 1,265,114 + DvMF_1040 0.87 +0.1 1,265,173 + -0.3 1,265,181 - -1.1 1,265,181 - -0.7 1,265,608 - -0.1 1,265,633 + -1.0 1,266,270 + DvMF_1041 0.57 -0.4 1,266,308 + DvMF_1041 0.60 -0.4 1,266,688 - DvMF_1041 0.90 -0.7 1,266,763 + -0.7 1,266,769 - -1.2 1,266,936 - DvMF_1042 0.13 -0.6 1,267,327 - DvMF_1042 0.67 -0.1 1,267,530 - -2.0 1,267,578 - -0.6 1,267,698 - -2.2 1,267,698 - -0.1
Or see this region's nucleotide sequence