Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0038 and DvMF_0039 overlap by 4 nucleotides DvMF_0039 and DvMF_0040 overlap by 1 nucleotides
DvMF_0038: DvMF_0038 - protein of unknown function DUF140 (RefSeq), at 50,269 to 51,414
_0038
DvMF_0039: DvMF_0039 - ABC transporter related (RefSeq), at 51,411 to 52,319
_0039
DvMF_0040: DvMF_0040 - Mammalian cell entry related domain protein (RefSeq), at 52,319 to 53,302
_0040
Position (kb)
51
52
53 Strain fitness (log2 ratio)
-2
-1
0
1 at 50.548 kb on + strand, within DvMF_0038 at 50.574 kb on - strand, within DvMF_0038 at 50.579 kb on - strand, within DvMF_0038 at 50.650 kb on + strand, within DvMF_0038 at 50.661 kb on + strand, within DvMF_0038 at 50.669 kb on - strand, within DvMF_0038 at 50.680 kb on + strand, within DvMF_0038 at 50.683 kb on - strand, within DvMF_0038 at 50.688 kb on - strand, within DvMF_0038 at 50.758 kb on + strand, within DvMF_0038 at 50.766 kb on + strand, within DvMF_0038 at 50.794 kb on - strand, within DvMF_0038 at 50.833 kb on + strand, within DvMF_0038 at 50.836 kb on - strand, within DvMF_0038 at 50.862 kb on - strand, within DvMF_0038 at 50.862 kb on - strand, within DvMF_0038 at 50.880 kb on + strand, within DvMF_0038 at 50.995 kb on + strand, within DvMF_0038 at 51.037 kb on - strand, within DvMF_0038 at 51.117 kb on + strand, within DvMF_0038 at 51.118 kb on - strand, within DvMF_0038 at 51.367 kb on - strand at 51.431 kb on - strand at 51.593 kb on + strand, within DvMF_0039 at 51.610 kb on + strand, within DvMF_0039 at 51.636 kb on + strand, within DvMF_0039 at 51.860 kb on + strand, within DvMF_0039 at 51.860 kb on + strand, within DvMF_0039 at 51.868 kb on - strand, within DvMF_0039 at 52.289 kb on - strand at 52.333 kb on + strand at 52.348 kb on - strand at 52.454 kb on - strand, within DvMF_0040 at 52.829 kb on + strand, within DvMF_0040 at 52.829 kb on + strand, within DvMF_0040 at 52.837 kb on - strand, within DvMF_0040 at 52.837 kb on - strand, within DvMF_0040 at 52.860 kb on - strand, within DvMF_0040 at 52.888 kb on + strand, within DvMF_0040 at 53.238 kb on + strand at 53.289 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 50,548 + DvMF_0038 0.24 -2.0 50,574 - DvMF_0038 0.27 -0.7 50,579 - DvMF_0038 0.27 -0.8 50,650 + DvMF_0038 0.33 -0.9 50,661 + DvMF_0038 0.34 +0.2 50,669 - DvMF_0038 0.35 -0.2 50,680 + DvMF_0038 0.36 -1.2 50,683 - DvMF_0038 0.36 -0.5 50,688 - DvMF_0038 0.37 -1.2 50,758 + DvMF_0038 0.43 -0.1 50,766 + DvMF_0038 0.43 -0.5 50,794 - DvMF_0038 0.46 -1.3 50,833 + DvMF_0038 0.49 -0.8 50,836 - DvMF_0038 0.49 -1.5 50,862 - DvMF_0038 0.52 +1.6 50,862 - DvMF_0038 0.52 -0.6 50,880 + DvMF_0038 0.53 -0.4 50,995 + DvMF_0038 0.63 -0.5 51,037 - DvMF_0038 0.67 -0.4 51,117 + DvMF_0038 0.74 -1.3 51,118 - DvMF_0038 0.74 +1.3 51,367 - -0.8 51,431 - -1.2 51,593 + DvMF_0039 0.20 -0.7 51,610 + DvMF_0039 0.22 -1.2 51,636 + DvMF_0039 0.25 +1.0 51,860 + DvMF_0039 0.49 -0.8 51,860 + DvMF_0039 0.49 -0.5 51,868 - DvMF_0039 0.50 -0.6 52,289 - -1.0 52,333 + -1.0 52,348 - +1.4 52,454 - DvMF_0040 0.14 -0.5 52,829 + DvMF_0040 0.52 -1.0 52,829 + DvMF_0040 0.52 -0.5 52,837 - DvMF_0040 0.53 +1.0 52,837 - DvMF_0040 0.53 +0.2 52,860 - DvMF_0040 0.55 +0.1 52,888 + DvMF_0040 0.58 +0.4 53,238 + -1.6 53,289 - -0.6
Or see this region's nucleotide sequence