Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4051

Experiment: BHIS with Dimethyl Sulfoxide 9 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 9 vol%
5,277,236	-		BT4050	0.80	-0.4
5,277,262	+		BT4050	0.80	+0.2
5,277,262	+		BT4050	0.80	-2.9
5,277,441	+		BT4050	0.85	+1.2
5,277,479	-		BT4050	0.86	+0.6
5,277,522	+		BT4050	0.87	-0.2
5,277,570	+		BT4050	0.88	-0.0
5,277,571	-		BT4050	0.88	+0.1
5,277,587	-				+1.6
5,277,588	+		BT4050	0.88	-2.0
5,277,589	-		BT4050	0.88	+0.9
5,277,589	-		BT4050	0.88	-1.9
5,277,594	+		BT4050	0.89	-3.2
5,277,666	+				+1.0
5,277,720	+				-0.0
5,277,739	+				-1.0
5,277,813	+				+0.6
5,277,818	-				-2.6
5,277,860	-				-3.8
5,277,860	-				-2.8
5,277,865	-				+0.4
5,277,909	+				+0.2
5,277,910	-				-1.4
5,277,977	-				-0.8
5,277,979	-				+1.3
5,278,054	+				+2.4
5,278,054	+				-0.1
5,278,070	+				+0.8
5,278,071	-				-1.6
5,278,071	-				+0.6
5,278,084	-				-1.9
5,278,084	-				+1.0
5,278,110	-				-1.0
5,278,233	+				-0.8
5,278,236	-				-0.3
5,278,258	-				+2.1
5,278,336	-		BT4051	0.17	-0.5
5,278,337	+		BT4051	0.17	-1.3
5,278,337	+		BT4051	0.17	-0.3
5,278,338	-		BT4051	0.18	-1.4
5,278,338	-		BT4051	0.18	-1.7
5,278,341	+		BT4051	0.18	+0.6
5,278,343	+		BT4051	0.18	-0.5
5,278,348	-		BT4051	0.19	-2.0
5,278,397	+		BT4051	0.24	+1.6
5,278,398	-		BT4051	0.24	+2.1
5,278,427	+		BT4051	0.27	-0.0
5,278,428	-		BT4051	0.27	-0.3
5,278,428	-		BT4051	0.27	-0.4
5,278,432	+		BT4051	0.28	+0.3
5,278,506	-		BT4051	0.36	+0.4
5,278,521	-		BT4051	0.37	-2.4
5,278,524	+		BT4051	0.38	+2.1
5,278,525	-		BT4051	0.38	-0.4
5,278,525	-		BT4051	0.38	-2.7
5,278,653	+		BT4051	0.52	+0.8
5,278,684	-		BT4051	0.55	-2.7
5,278,696	-		BT4051	0.57	+0.6
5,278,718	-		BT4051	0.59	-1.9
5,278,731	+		BT4051	0.60	-1.5
5,278,770	+		BT4051	0.65	+0.3
5,278,774	+		BT4051	0.65	+0.6
5,278,809	+		BT4051	0.69	-2.7
5,278,836	+		BT4051	0.72	-2.3
5,278,837	-		BT4051	0.72	-2.7
5,278,840	+				-1.4
5,278,960	+		BT4051	0.85	+0.2
5,279,106	+				+0.9
5,279,106	+				-2.5
5,279,113	+				-0.1
5,279,175	-				-0.4
5,279,187	+				+0.4
5,279,188	-				+0.6
5,279,219	+				+0.3
5,279,221	+				+1.0
5,279,264	-				-2.0
5,279,266	-				+0.6
5,279,266	-				-0.8
5,279,352	-				-1.8
5,279,450	+		BT4052	0.13	-1.3
5,279,450	+		BT4052	0.13	-1.8
5,279,451	-		BT4052	0.13	+1.6
5,279,451	-		BT4052	0.13	-0.0
5,279,558	+		BT4052	0.19	+0.6
5,279,559	-		BT4052	0.19	+1.0
5,279,606	-		BT4052	0.21	+0.6
5,279,697	-		BT4052	0.26	-2.8
5,279,730	+		BT4052	0.28	+1.6
5,279,752	-		BT4052	0.29	-2.6
5,279,752	-		BT4052	0.29	-0.5
5,279,760	-		BT4052	0.30	-2.1
5,279,786	+		BT4052	0.31	-1.3
5,280,086	+		BT4052	0.47	+1.0