Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2813

Experiment: BHIS with Dimethyl Sulfoxide 9 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 9 vol%
3,493,233	+		BT2811	0.89	-2.3
3,493,234	-		BT2811	0.89	-0.2
3,493,262	-				-0.9
3,493,320	+				+2.0
3,493,320	+				-0.3
3,493,321	-				+0.5
3,493,330	-				-1.5
3,493,330	-				-1.6
3,493,388	-				-0.3
3,493,463	+				-1.1
3,493,464	-				-0.1
3,493,474	-				-0.1
3,493,534	+		BT2812	0.10	-0.1
3,493,619	-		BT2812	0.25	-2.4
3,493,624	+		BT2812	0.26	+1.1
3,493,684	-		BT2812	0.37	-2.4
3,493,691	-		BT2812	0.38	-1.5
3,493,705	+		BT2812	0.41	-0.3
3,493,705	+		BT2812	0.41	+0.5
3,493,706	-		BT2812	0.41	-0.5
3,493,707	+		BT2812	0.41	-2.5
3,493,708	-		BT2812	0.41	-1.5
3,493,708	-		BT2812	0.41	+1.7
3,493,709	+		BT2812	0.41	+1.7
3,493,709	+		BT2812	0.41	+0.6
3,493,709	+		BT2812	0.41	-1.8
3,493,710	-		BT2812	0.41	-1.4
3,493,769	-		BT2812	0.52	-0.1
3,493,775	-		BT2812	0.53	-0.9
3,493,826	+		BT2812	0.62	+0.6
3,493,866	+		BT2812	0.69	-0.1
3,493,866	+		BT2812	0.69	-2.0
3,493,884	-		BT2812	0.72	+1.0
3,493,902	-		BT2812	0.75	+1.7
3,494,057	+				-3.5
3,494,080	+				-0.9
3,494,080	+				+1.2
3,494,082	+				-1.9
3,494,198	-				+0.7
3,494,440	-		BT2813	0.15	-1.5
3,494,441	+		BT2813	0.15	-0.3
3,494,566	+		BT2813	0.23	-1.7
3,494,567	-		BT2813	0.23	+2.0
3,494,579	+		BT2813	0.24	+0.5
3,494,580	-		BT2813	0.24	+0.1
3,494,580	-		BT2813	0.24	+1.7
3,494,621	-		BT2813	0.27	-3.5
3,494,625	-		BT2813	0.27	-3.5
3,494,636	+		BT2813	0.28	+0.3
3,494,655	+		BT2813	0.29	-0.5
3,494,677	-		BT2813	0.31	-2.6
3,494,685	+		BT2813	0.31	+0.2
3,494,686	-		BT2813	0.31	-2.0
3,494,750	-		BT2813	0.36	+0.1
3,494,759	+		BT2813	0.36	+0.0
3,494,816	+		BT2813	0.40	-0.6
3,494,817	-		BT2813	0.40	+2.2
3,494,825	+		BT2813	0.41	+0.7
3,494,825	+		BT2813	0.41	-2.3
3,494,826	-		BT2813	0.41	+1.2
3,494,826	-		BT2813	0.41	-0.3
3,494,826	-		BT2813	0.41	+0.1
3,494,839	+		BT2813	0.42	-0.5
3,494,840	-		BT2813	0.42	+0.1
3,494,840	-		BT2813	0.42	+0.5
3,494,840	-		BT2813	0.42	-0.3
3,494,840	-		BT2813	0.42	-2.5
3,494,901	+		BT2813	0.46	-0.6
3,494,942	+		BT2813	0.49	-0.9
3,494,943	-		BT2813	0.49	+1.4
3,494,955	+		BT2813	0.50	-0.2
3,494,969	-		BT2813	0.51	+0.4
3,494,977	-		BT2813	0.51	-1.8
3,494,981	-		BT2813	0.51	+0.5
3,494,992	-		BT2813	0.52	-0.4
3,495,061	-		BT2813	0.57	+0.5
3,495,244	-		BT2813	0.69	-0.1
3,495,244	-		BT2813	0.69	-2.7
3,495,271	-		BT2813	0.71	+0.5
3,495,288	-		BT2813	0.72	-0.9
3,495,295	-		BT2813	0.73	-2.0
3,495,343	+		BT2813	0.76	+1.7
3,495,344	-		BT2813	0.76	-0.9
3,495,344	-		BT2813	0.76	-1.7
3,495,344	-		BT2813	0.76	+1.3
3,495,383	+		BT2813	0.79	-1.3
3,495,410	+		BT2813	0.81	+0.7
3,495,411	-		BT2813	0.81	-2.0
3,495,425	+		BT2813	0.82	+0.7
3,495,425	+		BT2813	0.82	+2.3
3,495,426	-		BT2813	0.82	-1.6
3,495,429	+		BT2813	0.82	-1.9
3,495,492	+		BT2813	0.86	-0.3
3,495,493	-		BT2813	0.86	+0.5
3,495,493	-		BT2813	0.86	-1.3
3,495,494	+		BT2813	0.86	-2.5
3,495,495	-		BT2813	0.86	+1.7
3,495,518	+		BT2813	0.88	-1.9
3,495,533	-		BT2813	0.89	-0.6
3,495,537	-		BT2813	0.89	-3.5
3,495,537	-		BT2813	0.89	-0.6
3,495,537	-		BT2813	0.89	+0.6
3,495,587	+				+2.0
3,495,672	+				-0.6
3,495,673	-				-1.4
3,495,687	+				+1.7
3,495,693	+				-0.5
3,495,694	-				-2.8
3,495,793	-				+1.3
3,495,823	+		BT2814	0.11	-1.0
3,495,889	-		BT2814	0.18	-0.1
3,495,890	+		BT2814	0.18	+0.7
3,495,890	+		BT2814	0.18	+0.7
3,495,892	+		BT2814	0.19	-0.9
3,495,892	+		BT2814	0.19	-2.1
3,495,893	-		BT2814	0.19	-4.0
3,495,898	-		BT2814	0.19	-2.1
3,495,996	+		BT2814	0.30	-1.1
3,496,090	-		BT2814	0.40	-0.5
3,496,104	-		BT2814	0.42	+0.9
3,496,104	-		BT2814	0.42	+1.8
3,496,213	-		BT2814	0.53	-3.1
3,496,224	+		BT2814	0.54	-0.2
3,496,225	-		BT2814	0.55	-2.4
3,496,227	+		BT2814	0.55	-0.2
3,496,230	-		BT2814	0.55	+0.6
3,496,244	-		BT2814	0.57	-0.6
3,496,310	+		BT2814	0.64	-0.3
3,496,310	+		BT2814	0.64	+2.1
3,496,399	-		BT2814	0.73	-2.6
3,496,402	+		BT2814	0.74	-3.7
3,496,403	-		BT2814	0.74	-2.0
3,496,432	-		BT2814	0.77	-1.3
3,496,519	+		BT2814	0.86	-0.4
3,496,520	-		BT2814	0.86	-0.3
3,496,612	-				-1.1
3,496,612	-				-0.9
3,496,647	+				-2.9
3,496,682	+				+1.7
3,496,682	+				+0.6
3,496,682	+				-2.2
3,496,688	+				-1.1
3,496,688	+				-3.6
3,496,691	+				+1.4
3,496,692	-				-1.7
3,496,692	-				-0.1