Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2360

Experiment: BHIS with Dimethyl Sulfoxide 9 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 9 vol%
2,940,253	+		BT2359	0.66	+2.0
2,940,305	+		BT2359	0.73	+0.3
2,940,361	+		BT2359	0.79	+0.9
2,940,362	-		BT2359	0.79	-0.3
2,940,378	-		BT2359	0.81	+0.8
2,940,389	+		BT2359	0.83	-0.8
2,940,391	+		BT2359	0.83	+2.5
2,940,504	+				-2.9
2,940,505	-				+2.8
2,940,505	-				-1.6
2,940,516	+				+1.5
2,940,517	-				-1.2
2,940,534	+				-3.0
2,940,534	+				-0.8
2,940,535	-				-1.8
2,940,539	+				-0.7
2,940,616	+				+0.5
2,940,616	+				-1.5
2,940,636	+				-1.8
2,940,685	-				-1.5
2,940,689	-				-1.9
2,940,693	+				+0.5
2,940,736	-				-2.6
2,940,751	-				+0.3
2,940,789	+				+0.9
2,940,832	-				-0.2
2,940,889	-				-2.6
2,940,973	-				-1.4
2,941,008	+				-0.5
2,941,036	+				+1.5
2,941,058	+				-3.5
2,941,080	-				-3.5
2,941,099	-				-2.3
2,941,125	-				-0.2
2,941,125	-				+0.2
2,941,131	+				+3.5
2,941,131	+				-1.4
2,941,135	+				+0.2
2,941,135	+				-2.7
2,941,136	-				+0.2
2,941,193	+				+0.2
2,941,194	-				-1.8
2,941,200	+				-1.1
2,941,201	-				-3.6
2,941,240	+				-0.3
2,941,244	-				+0.2
2,941,244	-				+2.9
2,941,248	-				-3.1
2,941,273	+				-1.6
2,941,274	-				+0.8
2,941,274	-				-3.0
2,941,278	-				+1.5
2,941,293	-		BT2360	0.12	-0.5
2,941,309	-		BT2360	0.16	-2.2
2,941,362	-		BT2360	0.29	-2.1
2,941,368	+		BT2360	0.31	-0.4
2,941,368	+		BT2360	0.31	-0.1
2,941,369	-		BT2360	0.31	-2.3
2,941,371	-		BT2360	0.31	-2.8
2,941,371	-		BT2360	0.31	-1.3
2,941,383	+		BT2360	0.34	-3.0
2,941,415	-		BT2360	0.42	+0.2
2,941,417	+		BT2360	0.43	+0.4
2,941,418	-		BT2360	0.43	-3.0
2,941,418	-		BT2360	0.43	-3.2
2,941,418	-		BT2360	0.43	-0.1
2,941,418	-		BT2360	0.43	+1.5
2,941,447	-		BT2360	0.50	+0.3
2,941,488	+		BT2360	0.60	-2.3
2,941,532	+		BT2360	0.71	-2.7
2,941,596	+		BT2360	0.86	-0.2
2,941,596	+		BT2360	0.86	-1.9
2,941,606	-				+1.5
2,941,688	-				+0.5
2,941,822	-		BT2361	0.32	-2.2
2,941,822	-		BT2361	0.32	-2.7
2,941,844	+		BT2361	0.38	-0.8
2,941,844	+		BT2361	0.38	-3.0
2,941,845	-		BT2361	0.38	-0.5
2,941,845	-		BT2361	0.38	-1.2
2,941,845	-		BT2361	0.38	-1.3
2,941,845	-		BT2361	0.38	-0.7
2,941,847	-		BT2361	0.39	-0.1
2,941,888	+		BT2361	0.49	+0.5
2,942,016	-		BT2361	0.82	+0.5
2,942,038	-		BT2361	0.88	-2.5
2,942,038	-		BT2361	0.88	-0.3
2,942,085	+				-0.8
2,942,086	-				-1.5
2,942,098	+				-1.2
2,942,107	-				-2.8
2,942,185	-				-0.9
2,942,249	+				+0.2
2,942,250	-				-2.6
2,942,301	-				+0.9
2,942,335	+				-1.1
2,942,445	+				-2.0
2,942,445	+				+0.5
2,942,453	+				-1.9
2,942,454	-				-0.9
2,942,454	-				-0.3
2,942,454	-				-0.8
2,942,459	-				-0.1
2,942,475	-				-2.4
2,942,481	+				-0.8
2,942,482	-				-0.9
2,942,544	-				+1.6
2,942,611	+				-0.4
2,942,614	+				-0.1
2,942,615	-				-0.1
2,942,647	+				-1.9
2,942,647	+				-1.6